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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4945684
Gene symbol: Lhx1
Gene name: LIM homeobox protein 1
Probe: g01228
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g01228 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: telencephalon Present Widespread g01228_sj_g80_022_e11 , g01228_sj_g80_072_e11
TS19: diencephalon Strong Regionally restricted g01228_sj_g80_022_e11 , g01228_sj_g80_072_e11 Expression was region specific and scattered.
TS19: midbrain Strong Regionally restricted g01228_sj_g80_072_e11 , g01228_sj_g80_022_e11 Expression was region specific and scattered.
TS19: hindbrain Strong Regionally restricted g01228_sj_g80_022_e11 , g01228_sj_g80_072_e11 Expression was region specific and scattered.
TS19: future spinal cord Strong Regionally restricted g01228_sj_g80_072_e11 , g01228_sj_g80_022_e11 Expression was region specific and scattered.
Specimen g01228 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: ganglionic eminence Present Widespread g01228_sj_g80_022_e15 , g01228_sj_g80_122_e15 , g01228_sj_g80_072_e15
TS23: hippocampus Present Widespread g01228_sj_g80_072_e15 , g01228_sj_g80_022_e15 , g01228_sj_g80_122_e15
TS23: neocortex Present Widespread g01228_sj_g80_122_e15 , g01228_sj_g80_022_e15 , g01228_sj_g80_072_e15
TS23: retina Present Regionally restricted g01228_sj_g80_072_e15 , g01228_sj_g80_122_e15 , g01228_sj_g80_022_e15
TS23: spinal cord Present Widespread g01228_sj_g80_022_e15 , g01228_sj_g80_072_e15 , g01228_sj_g80_122_e15
TS23: cerebellum Strong Regionally restricted g01228_sj_g80_022_e15 , g01228_sj_g80_122_e15 , g01228_sj_g80_072_e15 Expression was region specific and scattered.
TS23: hindbrain Strong Regionally restricted g01228_sj_g80_072_e15 , g01228_sj_g80_022_e15 , g01228_sj_g80_122_e15 Expression was region specific and scattered.
TS23: hypothalamus Strong Regionally restricted g01228_sj_g80_122_e15 , g01228_sj_g80_072_e15 , g01228_sj_g80_022_e15 Expression was region specific and scattered.
TS23: midbrain Strong Regionally restricted g01228_sj_g80_072_e15 , g01228_sj_g80_022_e15 , g01228_sj_g80_122_e15 Expression was region specific and scattered.
Specimen g01228 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01228_sj_g85_122_p7 , g01228_sj_g85_022_p7 , g01228_sj_g85_072_p7
TS28: basal ganglia Present Widespread g01228_sj_g85_072_p7 , g01228_sj_g85_122_p7 , g01228_sj_g85_022_p7
TS28: brainstem Present Regionally restricted g01228_sj_g85_122_p7 , g01228_sj_g85_022_p7 , g01228_sj_g85_072_p7 Expression was region specific and scattered.
TS28: cerebral cortex Present Widespread g01228_sj_g85_122_p7 , g01228_sj_g85_022_p7 , g01228_sj_g85_072_p7
TS28: choroid plexus Present Regionally restricted g01228_sj_g85_122_p7 , g01228_sj_g85_022_p7 , g01228_sj_g85_072_p7
TS28: hippocampus Present Widespread g01228_sj_g85_122_p7 , g01228_sj_g85_022_p7 , g01228_sj_g85_072_p7
TS28: meninges Present Regionally restricted g01228_sj_g85_122_p7 , g01228_sj_g85_072_p7 , g01228_sj_g85_022_p7
TS28: midbrain Present Regionally restricted g01228_sj_g85_022_p7 , g01228_sj_g85_072_p7 , g01228_sj_g85_122_p7 Expression was region specific and scattered.
TS28: main olfactory bulb Present Widespread g01228_sj_g85_022_p7 , g01228_sj_g85_122_p7 , g01228_sj_g85_072_p7
TS28: retina Present Regionally restricted g01228_sj_g85_072_p7 , g01228_sj_g85_022_p7 , g01228_sj_g85_122_p7
TS28: spinal cord Present Regionally restricted g01228_sj_g85_022_p7 , g01228_sj_g85_122_p7 , g01228_sj_g85_072_p7 Expression was region specific and scattered.
TS28: thalamus Present Regionally restricted g01228_sj_g85_122_p7 , g01228_sj_g85_072_p7 , g01228_sj_g85_022_p7 Expression was region specific and scattered.
TS28: cerebellum Strong Regionally restricted g01228_sj_g85_072_p7 , g01228_sj_g85_122_p7 , g01228_sj_g85_022_p7 Expression was region specific and scattered.
TS28: hypothalamus Strong Regionally restricted g01228_sj_g85_022_p7 , g01228_sj_g85_122_p7 , g01228_sj_g85_072_p7 Expression was region specific and scattered.
Specimen g01228 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01228_sj_g81_122_ads , g01228_sj_g81_072_ads , g01228_sj_g81_022_ads , g01228_sj_g85_022_adc , g01228_sj_g85_072_adc
TS28: basal ganglia Present Widespread g01228_sj_g81_122_ads , g01228_sj_g81_022_ads , g01228_sj_g85_072_adc , g01228_sj_g81_072_ads , g01228_sj_g85_022_adc
TS28: brainstem Present Widespread g01228_sj_g81_072_ads , g01228_sj_g81_122_ads , g01228_sj_g85_022_adc , g01228_sj_g81_022_ads , g01228_sj_g85_072_adc
TS28: cerebral cortex Present Widespread g01228_sj_g85_022_adc , g01228_sj_g81_072_ads , g01228_sj_g81_122_ads , g01228_sj_g85_072_adc , g01228_sj_g81_022_ads
TS28: choroid plexus Present Regionally restricted g01228_sj_g81_122_ads , g01228_sj_g85_022_adc , g01228_sj_g85_072_adc , g01228_sj_g81_072_ads , g01228_sj_g81_022_ads
TS28: hippocampus Present Widespread g01228_sj_g81_122_ads , g01228_sj_g81_072_ads , g01228_sj_g85_072_adc , g01228_sj_g81_022_ads , g01228_sj_g85_022_adc
TS28: hypothalamus Present Widespread g01228_sj_g85_072_adc , g01228_sj_g81_122_ads , g01228_sj_g81_072_ads , g01228_sj_g85_022_adc , g01228_sj_g81_022_ads
TS28: meninges Present Regionally restricted g01228_sj_g85_072_adc , g01228_sj_g85_022_adc , g01228_sj_g81_072_ads , g01228_sj_g81_022_ads , g01228_sj_g81_122_ads
TS28: midbrain Present Widespread g01228_sj_g85_072_adc , g01228_sj_g85_022_adc , g01228_sj_g81_122_ads , g01228_sj_g81_022_ads , g01228_sj_g81_072_ads
TS28: main olfactory bulb Present Widespread g01228_sj_g85_072_adc , g01228_sj_g81_122_ads , g01228_sj_g81_022_ads , g01228_sj_g85_022_adc , g01228_sj_g81_072_ads
TS28: retina Present Regionally restricted g01228_sj_g85_022_adc , g01228_sj_g81_072_ads , g01228_sj_g81_122_ads , g01228_sj_g85_072_adc , g01228_sj_g81_022_ads
TS28: spinal cord Present Widespread g01228_sj_g81_072_ads , g01228_sj_g81_022_ads , g01228_sj_g85_072_adc , g01228_sj_g81_122_ads , g01228_sj_g85_022_adc
TS28: thalamus Present Widespread g01228_sj_g81_022_ads , g01228_sj_g85_022_adc , g01228_sj_g81_122_ads , g01228_sj_g85_072_adc , g01228_sj_g81_072_ads
TS28: cerebellum Strong Regionally restricted g01228_sj_g81_072_ads , g01228_sj_g85_022_adc , g01228_sj_g81_122_ads , g01228_sj_g85_072_adc , g01228_sj_g81_022_ads Expression was region specific and scattered.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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