Assay
|
Reference:
|
J:162220
Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
|
Assay type:
|
RNA in situ
|
MGI Accession ID:
|
MGI:4945549
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Gene symbol:
|
Smarca1
|
Gene name:
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
|
Probe:
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g01080
|
Probe preparation:
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Antisense labelled with P33 RNA
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Visualized with:
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Autoradiography
|
|
Results
|
Specimen
g01080 E11.5:
embryonic day 11.5
(more )
Specimen
g01080 E11.5:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
g01080 E15.5:
embryonic day 15.5
(more )
Specimen
g01080 E15.5:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: cerebellum |
Present |
Widespread |
g01080_sj_g59_042_e15
,
g01080_sj_g59_092_e15
,
g01080_sj_g59_142_e15
|
|
TS23: ganglionic eminence |
Present |
Widespread |
g01080_sj_g59_142_e15
,
g01080_sj_g59_092_e15
,
g01080_sj_g59_042_e15
|
|
TS23: hindbrain |
Present |
Widespread |
g01080_sj_g59_092_e15
,
g01080_sj_g59_142_e15
,
g01080_sj_g59_042_e15
|
|
TS23: hippocampus |
Present |
Widespread |
g01080_sj_g59_042_e15
,
g01080_sj_g59_142_e15
,
g01080_sj_g59_092_e15
|
|
TS23: hypothalamus |
Present |
Widespread |
g01080_sj_g59_092_e15
,
g01080_sj_g59_042_e15
,
g01080_sj_g59_142_e15
|
|
TS23: midbrain |
Present |
Widespread |
g01080_sj_g59_092_e15
,
g01080_sj_g59_142_e15
,
g01080_sj_g59_042_e15
|
|
TS23: neocortex |
Present |
Widespread |
g01080_sj_g59_092_e15
,
g01080_sj_g59_142_e15
,
g01080_sj_g59_042_e15
|
|
TS23: main olfactory bulb |
Present |
Widespread |
g01080_sj_g59_142_e15
,
g01080_sj_g59_042_e15
,
g01080_sj_g59_092_e15
|
|
TS23: retina |
Present |
Regionally restricted |
g01080_sj_g59_142_e15
,
g01080_sj_g59_092_e15
,
g01080_sj_g59_042_e15
|
|
TS23: spinal cord |
Present |
Widespread |
g01080_sj_g59_142_e15
,
g01080_sj_g59_092_e15
,
g01080_sj_g59_042_e15
|
|
Specimen
g01080 P7:
postnatal day 7
(more )
Specimen
g01080 P7:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
postnatal day 7
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: amygdala |
Present |
Widespread |
g01080_sj_g59_142_p7
,
g01080_sj_g59_042_p7
,
g01080_sj_g59_092_p7
|
|
TS28: basal ganglia |
Present |
Regionally restricted |
g01080_sj_g59_092_p7
,
g01080_sj_g59_142_p7
,
g01080_sj_g59_042_p7
|
Expression was region specific and scattered.
|
TS28: brainstem |
Present |
Widespread |
g01080_sj_g59_142_p7
,
g01080_sj_g59_042_p7
,
g01080_sj_g59_092_p7
|
|
TS28: cerebellum |
Present |
Widespread |
g01080_sj_g59_042_p7
,
g01080_sj_g59_092_p7
,
g01080_sj_g59_142_p7
|
|
TS28: cerebral cortex |
Present |
Widespread |
g01080_sj_g59_092_p7
,
g01080_sj_g59_142_p7
,
g01080_sj_g59_042_p7
|
|
TS28: choroid plexus |
Present |
Regionally restricted |
g01080_sj_g59_092_p7
,
g01080_sj_g59_042_p7
,
g01080_sj_g59_142_p7
|
|
TS28: hippocampus |
Present |
Regionally restricted |
g01080_sj_g59_042_p7
,
g01080_sj_g59_092_p7
,
g01080_sj_g59_142_p7
|
Expression was region specific and scattered.
|
TS28: hypothalamus |
Present |
Widespread |
g01080_sj_g59_042_p7
,
g01080_sj_g59_142_p7
,
g01080_sj_g59_092_p7
|
|
TS28: meninges |
Present |
Regionally restricted |
g01080_sj_g59_142_p7
,
g01080_sj_g59_042_p7
,
g01080_sj_g59_092_p7
|
|
TS28: midbrain |
Present |
Widespread |
g01080_sj_g59_092_p7
,
g01080_sj_g59_142_p7
,
g01080_sj_g59_042_p7
|
|
TS28: main olfactory bulb |
Present |
Regionally restricted |
g01080_sj_g59_042_p7
,
g01080_sj_g59_142_p7
,
g01080_sj_g59_092_p7
|
Expression was region specific and scattered.
|
TS28: retina |
Present |
Regionally restricted |
g01080_sj_g59_042_p7
,
g01080_sj_g59_142_p7
,
g01080_sj_g59_092_p7
|
|
TS28: spinal cord |
Present |
Widespread |
g01080_sj_g59_092_p7
,
g01080_sj_g59_042_p7
,
g01080_sj_g59_142_p7
|
|
TS28: thalamus |
Present |
Widespread |
g01080_sj_g59_042_p7
,
g01080_sj_g59_142_p7
,
g01080_sj_g59_092_p7
|
|
Specimen
g01080 Adult:
postnatal day 42
(more )
Specimen
g01080 Adult:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
postnatal day 42
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: amygdala |
Present |
Widespread |
g01080_sj_g59_092_ads
,
g01080_sj_g59_078_adc
,
g01080_sj_g59_142_ads
,
g01080_sj_g59_028_adc
,
g01080_sj_g59_042_ads
|
|
TS28: basal ganglia |
Present |
Widespread |
g01080_sj_g59_092_ads
,
g01080_sj_g59_028_adc
,
g01080_sj_g59_078_adc
,
g01080_sj_g59_042_ads
,
g01080_sj_g59_142_ads
|
|
TS28: brainstem |
Present |
Widespread |
g01080_sj_g59_028_adc
,
g01080_sj_g59_092_ads
,
g01080_sj_g59_078_adc
,
g01080_sj_g59_042_ads
,
g01080_sj_g59_142_ads
|
|
TS28: cerebellum |
Present |
Widespread |
g01080_sj_g59_042_ads
,
g01080_sj_g59_028_adc
,
g01080_sj_g59_078_adc
,
g01080_sj_g59_092_ads
,
g01080_sj_g59_142_ads
|
|
TS28: choroid plexus |
Present |
Regionally restricted |
g01080_sj_g59_042_ads
,
g01080_sj_g59_092_ads
,
g01080_sj_g59_142_ads
,
g01080_sj_g59_078_adc
,
g01080_sj_g59_028_adc
|
|
TS28: hypothalamus |
Present |
Widespread |
g01080_sj_g59_092_ads
,
g01080_sj_g59_142_ads
,
g01080_sj_g59_078_adc
,
g01080_sj_g59_028_adc
,
g01080_sj_g59_042_ads
|
|
TS28: midbrain |
Present |
Widespread |
g01080_sj_g59_092_ads
,
g01080_sj_g59_028_adc
,
g01080_sj_g59_142_ads
,
g01080_sj_g59_042_ads
,
g01080_sj_g59_078_adc
|
|
TS28: main olfactory bulb |
Present |
Widespread |
g01080_sj_g59_042_ads
,
g01080_sj_g59_092_ads
,
g01080_sj_g59_142_ads
,
g01080_sj_g59_028_adc
,
g01080_sj_g59_078_adc
|
|
TS28: retina |
Present |
Regionally restricted |
g01080_sj_g59_142_ads
,
g01080_sj_g59_078_adc
,
g01080_sj_g59_028_adc
,
g01080_sj_g59_092_ads
,
g01080_sj_g59_042_ads
|
|
TS28: spinal cord |
Present |
Regionally restricted |
g01080_sj_g59_078_adc
,
g01080_sj_g59_092_ads
,
g01080_sj_g59_142_ads
,
g01080_sj_g59_028_adc
,
g01080_sj_g59_042_ads
|
Expression was region specific and scattered.
|
TS28: thalamus |
Present |
Widespread |
g01080_sj_g59_028_adc
,
g01080_sj_g59_078_adc
,
g01080_sj_g59_092_ads
,
g01080_sj_g59_142_ads
,
g01080_sj_g59_042_ads
|
|
TS28: cerebral cortex |
Strong |
Regionally restricted |
g01080_sj_g59_078_adc
,
g01080_sj_g59_028_adc
,
g01080_sj_g59_042_ads
,
g01080_sj_g59_092_ads
,
g01080_sj_g59_142_ads
|
Expression was region specific and scattered.
|
TS28: hippocampus |
Strong |
Regionally restricted |
g01080_sj_g59_078_adc
,
g01080_sj_g59_142_ads
,
g01080_sj_g59_092_ads
,
g01080_sj_g59_028_adc
,
g01080_sj_g59_042_ads
|
Expression was region specific and scattered.
|
TS28: meninges |
Absent |
|
g01080_sj_g59_142_ads
,
g01080_sj_g59_078_adc
,
g01080_sj_g59_042_ads
,
g01080_sj_g59_028_adc
,
g01080_sj_g59_092_ads
|
|
|