About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4945546
Gene symbol: Slc1a6
Gene name: solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
Probe: g01077
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g01077 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Scattered g01077_sj_g94_021_e11 , g01077_sj_g94_071_e11
TS19: midbrain Present Scattered g01077_sj_g94_021_e11 , g01077_sj_g94_071_e11
TS19: hindbrain Present Scattered g01077_sj_g94_021_e11 , g01077_sj_g94_071_e11
TS19: future spinal cord Present Scattered g01077_sj_g94_021_e11 , g01077_sj_g94_071_e11
TS19: telencephalon Present Scattered g01077_sj_g94_021_e11 , g01077_sj_g94_071_e11
Specimen g01077 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: ganglionic eminence Present Regionally restricted g01077_sj_g96_036_e15 , g01077_sj_g96_136_e15 , g01077_sj_g96_086_e15 Expression was region specific and scattered.
TS23: hindbrain Present Widespread g01077_sj_g96_086_e15 , g01077_sj_g96_136_e15 , g01077_sj_g96_036_e15
TS23: hippocampus Present Widespread g01077_sj_g96_136_e15 , g01077_sj_g96_086_e15 , g01077_sj_g96_036_e15
TS23: hypothalamus Present Widespread g01077_sj_g96_036_e15 , g01077_sj_g96_136_e15 , g01077_sj_g96_086_e15
TS23: midbrain Present Regionally restricted g01077_sj_g96_036_e15 , g01077_sj_g96_086_e15 , g01077_sj_g96_136_e15 Expression was region specific and scattered.
TS23: neocortex Present Widespread g01077_sj_g96_036_e15 , g01077_sj_g96_086_e15 , g01077_sj_g96_136_e15
TS23: main olfactory bulb Present Widespread g01077_sj_g96_036_e15 , g01077_sj_g96_086_e15 , g01077_sj_g96_136_e15
TS23: retina Present Regionally restricted g01077_sj_g96_036_e15 , g01077_sj_g96_086_e15 , g01077_sj_g96_136_e15
TS23: cerebellum Strong Regionally restricted g01077_sj_g96_036_e15 , g01077_sj_g96_136_e15 , g01077_sj_g96_086_e15 Expression was region specific and scattered.
TS23: spinal cord Strong Regionally restricted g01077_sj_g96_136_e15 , g01077_sj_g96_036_e15 , g01077_sj_g96_086_e15 Expression was region specific and scattered.
Specimen g01077 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01077_sj_g102_018_p7 , g01077_sj_g102_118_p7 , g01077_sj_g102_068_p7
TS28: basal ganglia Present Widespread g01077_sj_g102_018_p7 , g01077_sj_g102_068_p7 , g01077_sj_g102_118_p7
TS28: brainstem Present Widespread g01077_sj_g102_068_p7 , g01077_sj_g102_018_p7 , g01077_sj_g102_118_p7
TS28: cerebral cortex Present Widespread g01077_sj_g102_118_p7 , g01077_sj_g102_068_p7 , g01077_sj_g102_018_p7
TS28: choroid plexus Present Regionally restricted g01077_sj_g102_018_p7 , g01077_sj_g102_068_p7 , g01077_sj_g102_118_p7
TS28: hippocampus Present Regionally restricted g01077_sj_g102_118_p7 , g01077_sj_g102_068_p7 , g01077_sj_g102_018_p7 Expression was region specific and scattered.
TS28: hypothalamus Present Widespread g01077_sj_g102_118_p7 , g01077_sj_g102_018_p7 , g01077_sj_g102_068_p7
TS28: meninges Present Regionally restricted g01077_sj_g102_118_p7 , g01077_sj_g102_018_p7 , g01077_sj_g102_068_p7
TS28: midbrain Present Widespread g01077_sj_g102_018_p7 , g01077_sj_g102_068_p7 , g01077_sj_g102_118_p7
TS28: main olfactory bulb Present Widespread g01077_sj_g102_118_p7 , g01077_sj_g102_018_p7 , g01077_sj_g102_068_p7
TS28: retina Present Regionally restricted g01077_sj_g102_068_p7 , g01077_sj_g102_018_p7 , g01077_sj_g102_118_p7
TS28: spinal cord Present Widespread g01077_sj_g102_018_p7 , g01077_sj_g102_068_p7 , g01077_sj_g102_118_p7
TS28: thalamus Present Regionally restricted g01077_sj_g102_118_p7 , g01077_sj_g102_018_p7 , g01077_sj_g102_068_p7 Expression was region specific and scattered.
TS28: cerebellum Strong Regionally restricted g01077_sj_g102_118_p7 , g01077_sj_g102_018_p7 , g01077_sj_g102_068_p7 Expression was region specific and scattered.
Specimen g01077 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01077_sj_g98_069_ads , g01077_sj_g103_019_adc , g01077_sj_g98_119_ads , g01077_sj_g103_069_adc , g01077_sj_g98_019_ads
TS28: basal ganglia Present Widespread g01077_sj_g98_019_ads , g01077_sj_g98_069_ads , g01077_sj_g103_069_adc , g01077_sj_g103_019_adc , g01077_sj_g98_119_ads
TS28: brainstem Present Widespread g01077_sj_g98_019_ads , g01077_sj_g98_069_ads , g01077_sj_g103_069_adc , g01077_sj_g98_119_ads , g01077_sj_g103_019_adc
TS28: cerebral cortex Present Widespread g01077_sj_g103_019_adc , g01077_sj_g98_019_ads , g01077_sj_g98_119_ads , g01077_sj_g103_069_adc , g01077_sj_g98_069_ads
TS28: choroid plexus Present Regionally restricted g01077_sj_g103_069_adc , g01077_sj_g98_069_ads , g01077_sj_g103_019_adc , g01077_sj_g98_019_ads , g01077_sj_g98_119_ads
TS28: hippocampus Present Widespread g01077_sj_g98_019_ads , g01077_sj_g103_019_adc , g01077_sj_g98_069_ads , g01077_sj_g98_119_ads , g01077_sj_g103_069_adc
TS28: hypothalamus Present Widespread g01077_sj_g103_069_adc , g01077_sj_g98_019_ads , g01077_sj_g103_019_adc , g01077_sj_g98_119_ads , g01077_sj_g98_069_ads
TS28: midbrain Present Widespread g01077_sj_g98_069_ads , g01077_sj_g98_119_ads , g01077_sj_g103_069_adc , g01077_sj_g103_019_adc , g01077_sj_g98_019_ads
TS28: main olfactory bulb Present Widespread g01077_sj_g98_019_ads , g01077_sj_g98_069_ads , g01077_sj_g98_119_ads , g01077_sj_g103_019_adc , g01077_sj_g103_069_adc
TS28: retina Present Regionally restricted g01077_sj_g98_119_ads , g01077_sj_g103_019_adc , g01077_sj_g98_019_ads , g01077_sj_g103_069_adc , g01077_sj_g98_069_ads
TS28: spinal cord Present Widespread g01077_sj_g103_069_adc , g01077_sj_g98_019_ads , g01077_sj_g98_119_ads , g01077_sj_g98_069_ads , g01077_sj_g103_019_adc
TS28: thalamus Present Widespread g01077_sj_g103_019_adc , g01077_sj_g103_069_adc , g01077_sj_g98_019_ads , g01077_sj_g98_069_ads , g01077_sj_g98_119_ads
TS28: cerebellum Strong Regionally restricted g01077_sj_g98_019_ads , g01077_sj_g103_019_adc , g01077_sj_g98_119_ads , g01077_sj_g103_069_adc , g01077_sj_g98_069_ads Expression was region specific and scattered.
TS28: meninges Absent g01077_sj_g103_019_adc , g01077_sj_g98_069_ads , g01077_sj_g98_019_ads , g01077_sj_g98_119_ads , g01077_sj_g103_069_adc
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory