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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4945539
Gene symbol: Sema3a
Gene name: sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
Probe: g01070
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g01070 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Scattered g01070_sj_g58_047_e11 , g01070_sj_g58_097_e11
TS19: midbrain Present Scattered g01070_sj_g58_097_e11 , g01070_sj_g58_047_e11
TS19: hindbrain Present Scattered g01070_sj_g58_097_e11 , g01070_sj_g58_047_e11
TS19: telencephalon Present Scattered g01070_sj_g58_097_e11 , g01070_sj_g58_047_e11
TS19: future spinal cord Strong Regionally restricted g01070_sj_g58_097_e11 , g01070_sj_g58_047_e11 Expression was region specific and scattered.
Specimen g01070 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: hippocampus Present Regionally restricted g01070_sj_g58_147_e15 , g01070_sj_g58_047_e15 , g01070_sj_g58_097_e15 Expression was region specific and scattered.
TS23: hypothalamus Present Widespread g01070_sj_g58_047_e15 , g01070_sj_g58_097_e15 , g01070_sj_g58_147_e15
TS23: midbrain Present Widespread g01070_sj_g58_147_e15 , g01070_sj_g58_047_e15 , g01070_sj_g58_097_e15
TS23: cerebellum Strong Regionally restricted g01070_sj_g58_147_e15 , g01070_sj_g58_097_e15 , g01070_sj_g58_047_e15 Expression was region specific and scattered.
TS23: ganglionic eminence Strong Regionally restricted g01070_sj_g58_097_e15 , g01070_sj_g58_147_e15 , g01070_sj_g58_047_e15 Expression was region specific and scattered.
TS23: hindbrain Strong Regionally restricted g01070_sj_g58_047_e15 , g01070_sj_g58_097_e15 , g01070_sj_g58_147_e15 Expression was region specific and scattered.
TS23: neocortex Strong Regionally restricted g01070_sj_g58_147_e15 , g01070_sj_g58_097_e15 , g01070_sj_g58_047_e15 Expression was region specific and scattered.
TS23: spinal cord Strong Regionally restricted g01070_sj_g58_097_e15 , g01070_sj_g58_147_e15 , g01070_sj_g58_047_e15 Expression was region specific and scattered.
Specimen g01070 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Regionally restricted g01070_sj_g58_047_p7 , g01070_sj_g58_097_p7 , g01070_sj_g58_147_p7 Expression was region specific and scattered.
TS28: hippocampus Present Regionally restricted g01070_sj_g58_047_p7 , g01070_sj_g58_097_p7 , g01070_sj_g58_147_p7 Expression was region specific and scattered.
TS28: hypothalamus Present Regionally restricted g01070_sj_g58_047_p7 , g01070_sj_g58_147_p7 , g01070_sj_g58_097_p7 Expression was region specific and scattered.
TS28: meninges Present Regionally restricted g01070_sj_g58_097_p7 , g01070_sj_g58_147_p7 , g01070_sj_g58_047_p7
TS28: midbrain Present Regionally restricted g01070_sj_g58_097_p7 , g01070_sj_g58_047_p7 , g01070_sj_g58_147_p7 Expression was region specific and scattered.
TS28: retina Present Regionally restricted g01070_sj_g58_147_p7 , g01070_sj_g58_047_p7 , g01070_sj_g58_097_p7
TS28: thalamus Present Regionally restricted g01070_sj_g58_147_p7 , g01070_sj_g58_047_p7 , g01070_sj_g58_097_p7 Expression was region specific and scattered.
TS28: basal ganglia Strong Regionally restricted g01070_sj_g58_047_p7 , g01070_sj_g58_147_p7 , g01070_sj_g58_097_p7 Expression was region specific and scattered.
TS28: brainstem Strong Regionally restricted g01070_sj_g58_097_p7 , g01070_sj_g58_147_p7 , g01070_sj_g58_047_p7 Expression was region specific and scattered.
TS28: cerebellum Strong Regionally restricted g01070_sj_g58_147_p7 , g01070_sj_g58_097_p7 , g01070_sj_g58_047_p7 Expression was region specific and scattered.
TS28: cerebral cortex Strong Regionally restricted g01070_sj_g58_047_p7 , g01070_sj_g58_147_p7 , g01070_sj_g58_097_p7 Expression was region specific and scattered.
TS28: main olfactory bulb Strong Regionally restricted g01070_sj_g58_147_p7 , g01070_sj_g58_097_p7 , g01070_sj_g58_047_p7 Expression was region specific and scattered.
TS28: spinal cord Strong Regionally restricted g01070_sj_g58_097_p7 , g01070_sj_g58_147_p7 , g01070_sj_g58_047_p7 Expression was region specific and scattered.
TS28: choroid plexus Absent g01070_sj_g58_097_p7 , g01070_sj_g58_147_p7 , g01070_sj_g58_047_p7
Specimen g01070 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01070_sj_g58_097_ads , g01070_sj_g58_097_adc , g01070_sj_g58_047_ads , g01070_sj_g58_047_adc , g01070_sj_g58_147_ads
TS28: basal ganglia Present Widespread g01070_sj_g58_147_ads , g01070_sj_g58_097_ads , g01070_sj_g58_047_adc , g01070_sj_g58_047_ads , g01070_sj_g58_097_adc
TS28: brainstem Present Regionally restricted g01070_sj_g58_047_ads , g01070_sj_g58_047_adc , g01070_sj_g58_097_ads , g01070_sj_g58_097_adc , g01070_sj_g58_147_ads Expression was region specific and scattered.
TS28: cerebellum Present Regionally restricted g01070_sj_g58_147_ads , g01070_sj_g58_047_ads , g01070_sj_g58_097_ads , g01070_sj_g58_047_adc , g01070_sj_g58_097_adc Expression was region specific and scattered.
TS28: cerebral cortex Present Regionally restricted g01070_sj_g58_047_ads , g01070_sj_g58_047_adc , g01070_sj_g58_097_ads , g01070_sj_g58_097_adc , g01070_sj_g58_147_ads Expression was region specific and scattered.
TS28: choroid plexus Present Regionally restricted g01070_sj_g58_097_adc , g01070_sj_g58_147_ads , g01070_sj_g58_097_ads , g01070_sj_g58_047_adc , g01070_sj_g58_047_ads
TS28: hippocampus Present Regionally restricted g01070_sj_g58_047_adc , g01070_sj_g58_097_adc , g01070_sj_g58_047_ads , g01070_sj_g58_147_ads , g01070_sj_g58_097_ads Expression was region specific and scattered.
TS28: hypothalamus Present Widespread g01070_sj_g58_147_ads , g01070_sj_g58_097_adc , g01070_sj_g58_047_ads , g01070_sj_g58_097_ads , g01070_sj_g58_047_adc
TS28: meninges Present Regionally restricted g01070_sj_g58_047_ads , g01070_sj_g58_097_ads , g01070_sj_g58_097_adc , g01070_sj_g58_047_adc , g01070_sj_g58_147_ads
TS28: midbrain Present Widespread g01070_sj_g58_047_ads , g01070_sj_g58_097_ads , g01070_sj_g58_047_adc , g01070_sj_g58_097_adc , g01070_sj_g58_147_ads
TS28: retina Present Regionally restricted g01070_sj_g58_147_ads , g01070_sj_g58_097_adc , g01070_sj_g58_047_adc , g01070_sj_g58_097_ads , g01070_sj_g58_047_ads
TS28: spinal cord Present Regionally restricted g01070_sj_g58_147_ads , g01070_sj_g58_097_adc , g01070_sj_g58_097_ads , g01070_sj_g58_047_adc , g01070_sj_g58_047_ads Expression was region specific and scattered.
TS28: thalamus Present Widespread g01070_sj_g58_047_adc , g01070_sj_g58_147_ads , g01070_sj_g58_047_ads , g01070_sj_g58_097_ads , g01070_sj_g58_097_adc
TS28: main olfactory bulb Strong Regionally restricted g01070_sj_g58_097_adc , g01070_sj_g58_047_adc , g01070_sj_g58_047_ads , g01070_sj_g58_147_ads , g01070_sj_g58_097_ads Expression was region specific and scattered.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/07/2024
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