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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4945476
Gene symbol: Csf1r
Gene name: colony stimulating factor 1 receptor
Probe: g00998
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g00998 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Regionally restricted g00998_sj_g80_057_e11 , g00998_sj_g80_007_e11 Expression was region specific and scattered.
TS19: midbrain Present Regionally restricted g00998_sj_g80_057_e11 , g00998_sj_g80_007_e11 Expression was region specific and scattered.
TS19: hindbrain Present Regionally restricted g00998_sj_g80_057_e11 , g00998_sj_g80_007_e11 Expression was region specific and scattered.
TS19: future spinal cord Present Regionally restricted g00998_sj_g80_007_e11 , g00998_sj_g80_057_e11 Expression was region specific and scattered.
TS19: telencephalon Present Regionally restricted g00998_sj_g80_057_e11 , g00998_sj_g80_007_e11 Expression was region specific and scattered.

Specimen g00998 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g00998_sj_g80_007_e15 , g00998_sj_g80_107_e15 , g00998_sj_g80_057_e15
TS23: ganglionic eminence Present Widespread g00998_sj_g80_007_e15 , g00998_sj_g80_057_e15 , g00998_sj_g80_107_e15
TS23: hindbrain Present Widespread g00998_sj_g80_007_e15 , g00998_sj_g80_057_e15 , g00998_sj_g80_107_e15
TS23: hippocampus Present Widespread g00998_sj_g80_107_e15 , g00998_sj_g80_007_e15 , g00998_sj_g80_057_e15
TS23: hypothalamus Present Widespread g00998_sj_g80_057_e15 , g00998_sj_g80_107_e15 , g00998_sj_g80_007_e15
TS23: midbrain Present Widespread g00998_sj_g80_107_e15 , g00998_sj_g80_007_e15 , g00998_sj_g80_057_e15
TS23: neocortex Present Widespread g00998_sj_g80_057_e15 , g00998_sj_g80_107_e15 , g00998_sj_g80_007_e15
TS23: main olfactory bulb Present Widespread g00998_sj_g80_007_e15 , g00998_sj_g80_107_e15 , g00998_sj_g80_057_e15
TS23: retina Present Regionally restricted g00998_sj_g80_107_e15 , g00998_sj_g80_057_e15 , g00998_sj_g80_007_e15
TS23: spinal cord Present Widespread g00998_sj_g80_007_e15 , g00998_sj_g80_057_e15 , g00998_sj_g80_107_e15

Specimen g00998 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00998_sj_g85_107_p7 , g00998_sj_g85_007_p7 , g00998_sj_g85_057_p7
TS28: basal ganglia Present Widespread g00998_sj_g85_107_p7 , g00998_sj_g85_007_p7 , g00998_sj_g85_057_p7
TS28: brainstem Present Widespread g00998_sj_g85_007_p7 , g00998_sj_g85_107_p7 , g00998_sj_g85_057_p7
TS28: cerebral cortex Present Widespread g00998_sj_g85_057_p7 , g00998_sj_g85_107_p7 , g00998_sj_g85_007_p7
TS28: choroid plexus Present Regionally restricted g00998_sj_g85_057_p7 , g00998_sj_g85_007_p7 , g00998_sj_g85_107_p7
TS28: hippocampus Present Widespread g00998_sj_g85_057_p7 , g00998_sj_g85_007_p7 , g00998_sj_g85_107_p7
TS28: hypothalamus Present Widespread g00998_sj_g85_057_p7 , g00998_sj_g85_007_p7 , g00998_sj_g85_107_p7
TS28: midbrain Present Widespread g00998_sj_g85_057_p7 , g00998_sj_g85_107_p7 , g00998_sj_g85_007_p7
TS28: main olfactory bulb Present Widespread g00998_sj_g85_057_p7 , g00998_sj_g85_007_p7 , g00998_sj_g85_107_p7
TS28: retina Present Regionally restricted g00998_sj_g85_107_p7 , g00998_sj_g85_057_p7 , g00998_sj_g85_007_p7
TS28: spinal cord Present Widespread g00998_sj_g85_057_p7 , g00998_sj_g85_107_p7 , g00998_sj_g85_007_p7
TS28: thalamus Present Widespread g00998_sj_g85_107_p7 , g00998_sj_g85_007_p7 , g00998_sj_g85_057_p7
TS28: cerebellum Strong Widespread g00998_sj_g85_107_p7 , g00998_sj_g85_057_p7 , g00998_sj_g85_007_p7
TS28: meninges Strong Regionally restricted g00998_sj_g85_107_p7 , g00998_sj_g85_057_p7 , g00998_sj_g85_007_p7

Specimen g00998 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00998_sj_g85_057_adc , g00998_sj_g81_107_ads , g00998_sj_g81_007_ads , g00998_sj_g85_007_adc , g00998_sj_g81_057_ads
TS28: basal ganglia Present Widespread g00998_sj_g85_057_adc , g00998_sj_g81_057_ads , g00998_sj_g85_007_adc , g00998_sj_g81_007_ads , g00998_sj_g81_107_ads
TS28: brainstem Present Widespread g00998_sj_g81_057_ads , g00998_sj_g81_107_ads , g00998_sj_g81_007_ads , g00998_sj_g85_057_adc , g00998_sj_g85_007_adc
TS28: cerebellum Present Regionally restricted g00998_sj_g81_057_ads , g00998_sj_g81_007_ads , g00998_sj_g85_057_adc , g00998_sj_g85_007_adc , g00998_sj_g81_107_ads Expression was region specific and scattered.
TS28: cerebral cortex Present Widespread g00998_sj_g81_107_ads , g00998_sj_g81_057_ads , g00998_sj_g81_007_ads , g00998_sj_g85_057_adc , g00998_sj_g85_007_adc
TS28: choroid plexus Present Regionally restricted g00998_sj_g81_007_ads , g00998_sj_g85_007_adc , g00998_sj_g81_057_ads , g00998_sj_g85_057_adc , g00998_sj_g81_107_ads
TS28: hippocampus Present Widespread g00998_sj_g85_057_adc , g00998_sj_g81_007_ads , g00998_sj_g81_107_ads , g00998_sj_g81_057_ads , g00998_sj_g85_007_adc
TS28: hypothalamus Present Widespread g00998_sj_g81_057_ads , g00998_sj_g85_057_adc , g00998_sj_g85_007_adc , g00998_sj_g81_107_ads , g00998_sj_g81_007_ads
TS28: meninges Present Regionally restricted g00998_sj_g85_057_adc , g00998_sj_g81_007_ads , g00998_sj_g81_057_ads , g00998_sj_g81_107_ads , g00998_sj_g85_007_adc
TS28: midbrain Present Widespread g00998_sj_g81_057_ads , g00998_sj_g85_057_adc , g00998_sj_g85_007_adc , g00998_sj_g81_007_ads , g00998_sj_g81_107_ads
TS28: main olfactory bulb Present Widespread g00998_sj_g81_107_ads , g00998_sj_g85_007_adc , g00998_sj_g81_007_ads , g00998_sj_g85_057_adc , g00998_sj_g81_057_ads
TS28: retina Present Regionally restricted g00998_sj_g81_007_ads , g00998_sj_g85_057_adc , g00998_sj_g81_057_ads , g00998_sj_g85_007_adc , g00998_sj_g81_107_ads
TS28: spinal cord Present Widespread g00998_sj_g85_007_adc , g00998_sj_g81_057_ads , g00998_sj_g85_057_adc , g00998_sj_g81_007_ads , g00998_sj_g81_107_ads
TS28: thalamus Present Widespread g00998_sj_g81_057_ads , g00998_sj_g81_107_ads , g00998_sj_g85_057_adc , g00998_sj_g81_007_ads , g00998_sj_g85_007_adc


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory