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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4945436
Gene symbol: Hdac5
Gene name: histone deacetylase 5
Probe: g00953
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g00953 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Widespread g00953_sj_g29_041_e11 , g00953_sj_g29_091_e11
TS19: midbrain Present Widespread g00953_sj_g29_091_e11 , g00953_sj_g29_041_e11
TS19: hindbrain Present Widespread g00953_sj_g29_041_e11 , g00953_sj_g29_091_e11
TS19: future spinal cord Present Widespread g00953_sj_g29_041_e11 , g00953_sj_g29_091_e11
TS19: telencephalon Present Widespread g00953_sj_g29_091_e11 , g00953_sj_g29_041_e11
Specimen g00953 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g00953_sj_g29_141_e15 , g00953_sj_g29_041_e15 , g00953_sj_g29_091_e15
TS23: ganglionic eminence Present Widespread g00953_sj_g29_091_e15 , g00953_sj_g29_041_e15 , g00953_sj_g29_141_e15
TS23: hindbrain Present Widespread g00953_sj_g29_141_e15 , g00953_sj_g29_041_e15 , g00953_sj_g29_091_e15
TS23: hippocampus Present Widespread g00953_sj_g29_091_e15 , g00953_sj_g29_141_e15 , g00953_sj_g29_041_e15
TS23: hypothalamus Present Widespread g00953_sj_g29_091_e15 , g00953_sj_g29_141_e15 , g00953_sj_g29_041_e15
TS23: midbrain Present Widespread g00953_sj_g29_041_e15 , g00953_sj_g29_141_e15 , g00953_sj_g29_091_e15
TS23: neocortex Present Regionally restricted g00953_sj_g29_091_e15 , g00953_sj_g29_041_e15 , g00953_sj_g29_141_e15 Expression was region specific and scattered.
TS23: main olfactory bulb Present Widespread g00953_sj_g29_141_e15 , g00953_sj_g29_091_e15 , g00953_sj_g29_041_e15
TS23: retina Present Regionally restricted g00953_sj_g29_091_e15 , g00953_sj_g29_041_e15 , g00953_sj_g29_141_e15
TS23: spinal cord Present Regionally restricted g00953_sj_g29_041_e15 , g00953_sj_g29_141_e15 , g00953_sj_g29_091_e15 Expression was region specific and scattered.
Specimen g00953 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00953_sj_g29_141_p7 , g00953_sj_g29_041_p7 , g00953_sj_g29_091_p7
TS28: basal ganglia Present Widespread g00953_sj_g29_041_p7 , g00953_sj_g29_141_p7 , g00953_sj_g29_091_p7
TS28: brainstem Present Regionally restricted g00953_sj_g29_041_p7 , g00953_sj_g29_141_p7 , g00953_sj_g29_091_p7 Expression was region specific and scattered.
TS28: cerebellum Present Regionally restricted g00953_sj_g29_141_p7 , g00953_sj_g29_041_p7 , g00953_sj_g29_091_p7 Expression was region specific and scattered.
TS28: cerebral cortex Present Regionally restricted g00953_sj_g29_141_p7 , g00953_sj_g29_091_p7 , g00953_sj_g29_041_p7 Expression was region specific and scattered.
TS28: choroid plexus Present Regionally restricted g00953_sj_g29_141_p7 , g00953_sj_g29_091_p7 , g00953_sj_g29_041_p7
TS28: hippocampus Present Regionally restricted g00953_sj_g29_091_p7 , g00953_sj_g29_041_p7 , g00953_sj_g29_141_p7 Expression was region specific and scattered.
TS28: hypothalamus Present Widespread g00953_sj_g29_041_p7 , g00953_sj_g29_091_p7 , g00953_sj_g29_141_p7
TS28: meninges Present Regionally restricted g00953_sj_g29_041_p7 , g00953_sj_g29_091_p7 , g00953_sj_g29_141_p7
TS28: midbrain Present Widespread g00953_sj_g29_141_p7 , g00953_sj_g29_041_p7 , g00953_sj_g29_091_p7
TS28: main olfactory bulb Present Regionally restricted g00953_sj_g29_041_p7 , g00953_sj_g29_141_p7 , g00953_sj_g29_091_p7 Expression was region specific and scattered.
TS28: retina Present Regionally restricted g00953_sj_g29_091_p7 , g00953_sj_g29_041_p7 , g00953_sj_g29_141_p7
TS28: spinal cord Present Widespread g00953_sj_g29_091_p7 , g00953_sj_g29_041_p7 , g00953_sj_g29_141_p7
TS28: thalamus Present Regionally restricted g00953_sj_g29_041_p7 , g00953_sj_g29_141_p7 , g00953_sj_g29_091_p7 Expression was region specific and scattered.
Specimen g00953 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00953_sj_g6_051_adc , g00953_sj_g6_131_ads , g00953_sj_g6_081_ads , g00953_sj_g6_001_adc , g00953_sj_g6_031_ads
TS28: brainstem Present Widespread g00953_sj_g6_131_ads , g00953_sj_g6_031_ads , g00953_sj_g6_051_adc , g00953_sj_g6_001_adc , g00953_sj_g6_081_ads
TS28: choroid plexus Present Regionally restricted g00953_sj_g6_051_adc , g00953_sj_g6_001_adc , g00953_sj_g6_031_ads , g00953_sj_g6_131_ads , g00953_sj_g6_081_ads
TS28: hypothalamus Present Widespread g00953_sj_g6_131_ads , g00953_sj_g6_081_ads , g00953_sj_g6_051_adc , g00953_sj_g6_031_ads , g00953_sj_g6_001_adc
TS28: meninges Present Regionally restricted g00953_sj_g6_031_ads , g00953_sj_g6_001_adc , g00953_sj_g6_081_ads , g00953_sj_g6_051_adc , g00953_sj_g6_131_ads
TS28: midbrain Present Widespread g00953_sj_g6_131_ads , g00953_sj_g6_051_adc , g00953_sj_g6_031_ads , g00953_sj_g6_001_adc , g00953_sj_g6_081_ads
TS28: retina Present Regionally restricted g00953_sj_g6_001_adc , g00953_sj_g6_131_ads , g00953_sj_g6_081_ads , g00953_sj_g6_031_ads , g00953_sj_g6_051_adc
TS28: spinal cord Present Regionally restricted g00953_sj_g6_031_ads , g00953_sj_g6_001_adc , g00953_sj_g6_131_ads , g00953_sj_g6_081_ads , g00953_sj_g6_051_adc Expression was region specific and scattered.
TS28: basal ganglia Strong Regionally restricted g00953_sj_g6_131_ads , g00953_sj_g6_001_adc , g00953_sj_g6_051_adc , g00953_sj_g6_081_ads , g00953_sj_g6_031_ads Expression was region specific and scattered.
TS28: cerebellum Strong Regionally restricted g00953_sj_g6_031_ads , g00953_sj_g6_081_ads , g00953_sj_g6_131_ads , g00953_sj_g6_001_adc , g00953_sj_g6_051_adc Expression was region specific and scattered.
TS28: cerebral cortex Strong Regionally restricted g00953_sj_g6_081_ads , g00953_sj_g6_001_adc , g00953_sj_g6_031_ads , g00953_sj_g6_051_adc , g00953_sj_g6_131_ads Expression was region specific and scattered.
TS28: hippocampus Strong Regionally restricted g00953_sj_g6_031_ads , g00953_sj_g6_081_ads , g00953_sj_g6_051_adc , g00953_sj_g6_001_adc , g00953_sj_g6_131_ads Expression was region specific and scattered.
TS28: main olfactory bulb Strong Regionally restricted g00953_sj_g6_081_ads , g00953_sj_g6_051_adc , g00953_sj_g6_131_ads , g00953_sj_g6_031_ads , g00953_sj_g6_001_adc Expression was region specific and scattered.
TS28: thalamus Strong Regionally restricted g00953_sj_g6_081_ads , g00953_sj_g6_051_adc , g00953_sj_g6_001_adc , g00953_sj_g6_131_ads , g00953_sj_g6_031_ads Expression was region specific and scattered.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory