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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4944979
Gene symbol: Rufy3
Gene name: RUN and FYVE domain containing 3
Probe: g00420
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g00420 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Regionally restricted g00420_sj_g78_011_e11 , g00420_sj_g78_061_e11 Expression was region specific and scattered.
TS19: telencephalon Present Regionally restricted g00420_sj_g78_061_e11 , g00420_sj_g78_011_e11 Expression was region specific and scattered.
TS19: midbrain Strong Regionally restricted g00420_sj_g78_061_e11 , g00420_sj_g78_011_e11 Expression was region specific and scattered.
TS19: hindbrain Strong Regionally restricted g00420_sj_g78_061_e11 , g00420_sj_g78_011_e11 Expression was region specific and scattered.
TS19: future spinal cord Strong Regionally restricted g00420_sj_g78_061_e11 , g00420_sj_g78_011_e11 Expression was region specific and scattered.
Specimen g00420 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g00420_sj_g78_061_e15 , g00420_sj_g78_011_e15 , g00420_sj_g78_111_e15
TS23: hypothalamus Present Widespread g00420_sj_g78_061_e15 , g00420_sj_g78_011_e15 , g00420_sj_g78_111_e15
TS23: midbrain Present Widespread g00420_sj_g78_111_e15 , g00420_sj_g78_061_e15 , g00420_sj_g78_011_e15
TS23: neocortex Present Widespread g00420_sj_g78_111_e15 , g00420_sj_g78_061_e15 , g00420_sj_g78_011_e15
TS23: spinal cord Present Regionally restricted g00420_sj_g78_111_e15 , g00420_sj_g78_061_e15 , g00420_sj_g78_011_e15 Expression was region specific and scattered.
TS23: ganglionic eminence Strong Widespread g00420_sj_g78_111_e15 , g00420_sj_g78_061_e15 , g00420_sj_g78_011_e15
TS23: hindbrain Strong Widespread g00420_sj_g78_011_e15 , g00420_sj_g78_111_e15 , g00420_sj_g78_061_e15
TS23: hippocampus Strong Widespread g00420_sj_g78_111_e15 , g00420_sj_g78_061_e15 , g00420_sj_g78_011_e15
Specimen g00420 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00420_sj_g82_018_p7 , g00420_sj_g82_118_p7 , g00420_sj_g82_068_p7
TS28: basal ganglia Present Widespread g00420_sj_g82_118_p7 , g00420_sj_g82_068_p7 , g00420_sj_g82_018_p7
TS28: brainstem Present Widespread g00420_sj_g82_068_p7 , g00420_sj_g82_118_p7 , g00420_sj_g82_018_p7
TS28: cerebellum Present Widespread g00420_sj_g82_068_p7 , g00420_sj_g82_018_p7 , g00420_sj_g82_118_p7
TS28: choroid plexus Present Regionally restricted g00420_sj_g82_118_p7 , g00420_sj_g82_018_p7 , g00420_sj_g82_068_p7
TS28: meninges Present Regionally restricted g00420_sj_g82_068_p7 , g00420_sj_g82_018_p7 , g00420_sj_g82_118_p7
TS28: midbrain Present Widespread g00420_sj_g82_118_p7 , g00420_sj_g82_068_p7 , g00420_sj_g82_018_p7
TS28: retina Present Regionally restricted g00420_sj_g82_068_p7 , g00420_sj_g82_018_p7 , g00420_sj_g82_118_p7
TS28: spinal cord Present Widespread g00420_sj_g82_118_p7 , g00420_sj_g82_068_p7 , g00420_sj_g82_018_p7
TS28: thalamus Present Widespread g00420_sj_g82_068_p7 , g00420_sj_g82_118_p7 , g00420_sj_g82_018_p7
TS28: cerebral cortex Strong Regionally restricted g00420_sj_g82_118_p7 , g00420_sj_g82_068_p7 , g00420_sj_g82_018_p7 Expression was region specific and scattered.
TS28: hippocampus Strong Regionally restricted g00420_sj_g82_068_p7 , g00420_sj_g82_118_p7 , g00420_sj_g82_018_p7 Expression was region specific and scattered.
TS28: hypothalamus Strong Regionally restricted g00420_sj_g82_018_p7 , g00420_sj_g82_068_p7 , g00420_sj_g82_118_p7 Expression was region specific and scattered.
TS28: main olfactory bulb Strong Regionally restricted g00420_sj_g82_068_p7 , g00420_sj_g82_118_p7 , g00420_sj_g82_018_p7 Expression was region specific and scattered.
Specimen g00420 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00420_sj_g88_027_adc , g00420_sj_g80_011_ads , g00420_sj_g80_111_ads , g00420_sj_g80_061_ads , g00420_sj_g88_077_adc
TS28: basal ganglia Present Widespread g00420_sj_g80_111_ads , g00420_sj_g80_011_ads , g00420_sj_g88_077_adc , g00420_sj_g88_027_adc , g00420_sj_g80_061_ads
TS28: brainstem Present Regionally restricted g00420_sj_g80_011_ads , g00420_sj_g80_061_ads , g00420_sj_g80_111_ads , g00420_sj_g88_027_adc , g00420_sj_g88_077_adc Expression was region specific and scattered.
TS28: cerebellum Present Regionally restricted g00420_sj_g88_077_adc , g00420_sj_g80_061_ads , g00420_sj_g80_011_ads , g00420_sj_g88_027_adc , g00420_sj_g80_111_ads Expression was region specific and scattered.
TS28: cerebral cortex Present Widespread g00420_sj_g88_027_adc , g00420_sj_g80_011_ads , g00420_sj_g80_111_ads , g00420_sj_g88_077_adc , g00420_sj_g80_061_ads
TS28: choroid plexus Present Regionally restricted g00420_sj_g88_077_adc , g00420_sj_g80_111_ads , g00420_sj_g88_027_adc , g00420_sj_g80_011_ads , g00420_sj_g80_061_ads
TS28: hippocampus Present Regionally restricted g00420_sj_g88_027_adc , g00420_sj_g80_111_ads , g00420_sj_g80_011_ads , g00420_sj_g80_061_ads , g00420_sj_g88_077_adc Expression was region specific and scattered.
TS28: hypothalamus Present Widespread g00420_sj_g80_011_ads , g00420_sj_g88_077_adc , g00420_sj_g88_027_adc , g00420_sj_g80_111_ads , g00420_sj_g80_061_ads
TS28: meninges Present Regionally restricted g00420_sj_g80_061_ads , g00420_sj_g80_011_ads , g00420_sj_g80_111_ads , g00420_sj_g88_077_adc , g00420_sj_g88_027_adc
TS28: midbrain Present Widespread g00420_sj_g88_027_adc , g00420_sj_g80_111_ads , g00420_sj_g80_011_ads , g00420_sj_g88_077_adc , g00420_sj_g80_061_ads
TS28: main olfactory bulb Present Widespread g00420_sj_g80_011_ads , g00420_sj_g80_061_ads , g00420_sj_g88_027_adc , g00420_sj_g88_077_adc , g00420_sj_g80_111_ads
TS28: retina Present Regionally restricted g00420_sj_g88_027_adc , g00420_sj_g88_077_adc , g00420_sj_g80_061_ads , g00420_sj_g80_111_ads , g00420_sj_g80_011_ads
TS28: spinal cord Present Regionally restricted g00420_sj_g88_027_adc , g00420_sj_g80_061_ads , g00420_sj_g88_077_adc , g00420_sj_g80_011_ads , g00420_sj_g80_111_ads Expression was region specific and scattered.
TS28: thalamus Present Widespread g00420_sj_g80_011_ads , g00420_sj_g88_027_adc , g00420_sj_g88_077_adc , g00420_sj_g80_111_ads , g00420_sj_g80_061_ads
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/14/2024
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