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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4944928
Gene symbol: Htr1a
Gene name: 5-hydroxytryptamine (serotonin) receptor 1A
Probe: g00366
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g00366 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Widespread g00366_sj_g49_018_e11 , g00366_sj_g49_068_e11
TS19: midbrain Present Widespread g00366_sj_g49_068_e11 , g00366_sj_g49_018_e11
TS19: hindbrain Present Widespread g00366_sj_g49_068_e11 , g00366_sj_g49_018_e11
TS19: future spinal cord Present Regionally restricted g00366_sj_g49_068_e11 , g00366_sj_g49_018_e11 Expression was region specific and scattered.
TS19: telencephalon Present Widespread g00366_sj_g49_068_e11 , g00366_sj_g49_018_e11
Specimen g00366 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus Present Regionally restricted g00366_sj_g51_083_e15 , g00366_sj_g51_033_e15 , g00366_sj_g51_133_e15 Expression was region specific and scattered.
TS23: spinal cord Present Regionally restricted g00366_sj_g51_083_e15 , g00366_sj_g51_033_e15 , g00366_sj_g51_133_e15 Expression was region specific and scattered.
TS23: cerebellum Absent g00366_sj_g51_033_e15 , g00366_sj_g51_083_e15 , g00366_sj_g51_133_e15
TS23: ganglionic eminence Absent g00366_sj_g51_033_e15 , g00366_sj_g51_133_e15 , g00366_sj_g51_083_e15
TS23: hindbrain Absent g00366_sj_g51_033_e15 , g00366_sj_g51_083_e15 , g00366_sj_g51_133_e15
TS23: hippocampus Absent g00366_sj_g51_133_e15 , g00366_sj_g51_033_e15 , g00366_sj_g51_083_e15
TS23: midbrain Absent g00366_sj_g51_083_e15 , g00366_sj_g51_033_e15 , g00366_sj_g51_133_e15
TS23: neocortex Absent g00366_sj_g51_133_e15 , g00366_sj_g51_083_e15 , g00366_sj_g51_033_e15
TS23: main olfactory bulb Absent g00366_sj_g51_033_e15 , g00366_sj_g51_133_e15 , g00366_sj_g51_083_e15
Specimen g00366 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: basal ganglia Present Widespread g00366_sj_g49_118_p7 , g00366_sj_g49_068_p7 , g00366_sj_g49_018_p7
TS28: cerebellum Present Regionally restricted g00366_sj_g49_018_p7 , g00366_sj_g49_068_p7 , g00366_sj_g49_118_p7 Expression was region specific and scattered.
TS28: cerebral cortex Present Widespread g00366_sj_g49_018_p7 , g00366_sj_g49_068_p7 , g00366_sj_g49_118_p7
TS28: main olfactory bulb Present Regionally restricted g00366_sj_g49_018_p7 , g00366_sj_g49_118_p7 , g00366_sj_g49_068_p7 Expression was region specific and scattered.
TS28: retina Present Regionally restricted g00366_sj_g49_068_p7 , g00366_sj_g49_018_p7 , g00366_sj_g49_118_p7
TS28: thalamus Present Regionally restricted g00366_sj_g49_018_p7 , g00366_sj_g49_118_p7 , g00366_sj_g49_068_p7 Expression was region specific and scattered.
TS28: amygdala Strong Regionally restricted g00366_sj_g49_068_p7 , g00366_sj_g49_018_p7 , g00366_sj_g49_118_p7 Expression was region specific and scattered.
TS28: brainstem Strong Regionally restricted g00366_sj_g49_018_p7 , g00366_sj_g49_068_p7 , g00366_sj_g49_118_p7 Expression was region specific and scattered.
TS28: hippocampus Strong Regionally restricted g00366_sj_g49_068_p7 , g00366_sj_g49_118_p7 , g00366_sj_g49_018_p7 Expression was region specific and scattered.
TS28: hypothalamus Strong Regionally restricted g00366_sj_g49_018_p7 , g00366_sj_g49_068_p7 , g00366_sj_g49_118_p7 Expression was region specific and scattered.
TS28: midbrain Strong Regionally restricted g00366_sj_g49_118_p7 , g00366_sj_g49_068_p7 , g00366_sj_g49_018_p7 Expression was region specific and scattered.
TS28: spinal cord Strong Regionally restricted g00366_sj_g49_068_p7 , g00366_sj_g49_118_p7 , g00366_sj_g49_018_p7 Expression was region specific and scattered.
Specimen g00366 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Regionally restricted g00366_sj_g49_068_adc , g00366_sj_g49_118_ads , g00366_sj_g49_018_adc , g00366_sj_g49_068_ads , g00366_sj_g49_018_ads Expression was region specific and scattered.
TS28: basal ganglia Present Widespread g00366_sj_g49_018_adc , g00366_sj_g49_068_ads , g00366_sj_g49_118_ads , g00366_sj_g49_018_ads , g00366_sj_g49_068_adc
TS28: cerebellum Present Regionally restricted g00366_sj_g49_118_ads , g00366_sj_g49_068_ads , g00366_sj_g49_018_ads , g00366_sj_g49_018_adc , g00366_sj_g49_068_adc Expression was region specific and scattered.
TS28: hypothalamus Present Regionally restricted g00366_sj_g49_118_ads , g00366_sj_g49_018_adc , g00366_sj_g49_068_adc , g00366_sj_g49_068_ads , g00366_sj_g49_018_ads Expression was region specific and scattered.
TS28: main olfactory bulb Present Regionally restricted g00366_sj_g49_068_adc , g00366_sj_g49_118_ads , g00366_sj_g49_068_ads , g00366_sj_g49_018_ads , g00366_sj_g49_018_adc Expression was region specific and scattered.
TS28: retina Present Regionally restricted g00366_sj_g49_068_ads , g00366_sj_g49_018_ads , g00366_sj_g49_018_adc , g00366_sj_g49_068_adc , g00366_sj_g49_118_ads Expression was region specific and scattered.
TS28: spinal cord Present Regionally restricted g00366_sj_g49_018_ads , g00366_sj_g49_018_adc , g00366_sj_g49_068_adc , g00366_sj_g49_068_ads , g00366_sj_g49_118_ads Expression was region specific and scattered.
TS28: thalamus Present Widespread g00366_sj_g49_068_ads , g00366_sj_g49_018_adc , g00366_sj_g49_118_ads , g00366_sj_g49_068_adc , g00366_sj_g49_018_ads
TS28: brainstem Strong Regionally restricted g00366_sj_g49_118_ads , g00366_sj_g49_018_adc , g00366_sj_g49_068_adc , g00366_sj_g49_018_ads , g00366_sj_g49_068_ads Expression was region specific and scattered.
TS28: hippocampus Strong Regionally restricted g00366_sj_g49_068_adc , g00366_sj_g49_118_ads , g00366_sj_g49_068_ads , g00366_sj_g49_018_ads , g00366_sj_g49_018_adc Expression was region specific and scattered.
TS28: cerebral cortex Present g00366_sj_g49_068_ads , g00366_sj_g49_018_ads , g00366_sj_g49_018_adc , g00366_sj_g49_068_adc , g00366_sj_g49_118_ads
TS28: midbrain Present g00366_sj_g49_068_ads , g00366_sj_g49_018_adc , g00366_sj_g49_118_ads , g00366_sj_g49_018_ads , g00366_sj_g49_068_adc
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory