About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4944848
Gene symbol: Col20a1
Gene name: collagen, type XX, alpha 1
Probe: g00279
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g00279 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: hindbrain Present Widespread g00279_sj_g40_065_e11 , g00279_sj_g40_015_e11
TS19: future spinal cord Present Widespread g00279_sj_g40_015_e11 , g00279_sj_g40_065_e11
TS19: diencephalon Strong Regionally restricted g00279_sj_g40_065_e11 , g00279_sj_g40_015_e11 Expression was region specific and scattered.
TS19: midbrain Strong Regionally restricted g00279_sj_g40_015_e11 , g00279_sj_g40_065_e11 Expression was region specific and scattered.
TS19: telencephalon Strong Regionally restricted g00279_sj_g40_065_e11 , g00279_sj_g40_015_e11 Expression was region specific and scattered.
Specimen g00279 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g00279_sj_g37_033_e15 , g00279_sj_g37_083_e15 , g00279_sj_g37_133_e15
TS23: ganglionic eminence Present Widespread g00279_sj_g37_133_e15 , g00279_sj_g37_033_e15 , g00279_sj_g37_083_e15
TS23: hindbrain Present Widespread g00279_sj_g37_083_e15 , g00279_sj_g37_133_e15 , g00279_sj_g37_033_e15
TS23: hippocampus Present Widespread g00279_sj_g37_033_e15 , g00279_sj_g37_083_e15 , g00279_sj_g37_133_e15
TS23: hypothalamus Present Widespread g00279_sj_g37_133_e15 , g00279_sj_g37_083_e15 , g00279_sj_g37_033_e15
TS23: midbrain Present Widespread g00279_sj_g37_033_e15 , g00279_sj_g37_133_e15 , g00279_sj_g37_083_e15
TS23: neocortex Present Widespread g00279_sj_g37_133_e15 , g00279_sj_g37_083_e15 , g00279_sj_g37_033_e15
TS23: spinal cord Present Widespread g00279_sj_g37_083_e15 , g00279_sj_g37_133_e15 , g00279_sj_g37_033_e15
Specimen g00279 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00279_sj_g37_083_p7 , g00279_sj_g37_033_p7 , g00279_sj_g37_133_p7
TS28: basal ganglia Present Widespread g00279_sj_g37_033_p7 , g00279_sj_g37_133_p7 , g00279_sj_g37_083_p7
TS28: brainstem Present Widespread g00279_sj_g37_033_p7 , g00279_sj_g37_083_p7 , g00279_sj_g37_133_p7
TS28: cerebellum Present Widespread g00279_sj_g37_133_p7 , g00279_sj_g37_033_p7 , g00279_sj_g37_083_p7
TS28: cerebral cortex Present Widespread g00279_sj_g37_133_p7 , g00279_sj_g37_083_p7 , g00279_sj_g37_033_p7
TS28: choroid plexus Present Regionally restricted g00279_sj_g37_083_p7 , g00279_sj_g37_033_p7 , g00279_sj_g37_133_p7
TS28: hippocampus Present Regionally restricted g00279_sj_g37_033_p7 , g00279_sj_g37_083_p7 , g00279_sj_g37_133_p7 Expression was region specific and scattered.
TS28: hypothalamus Present Widespread g00279_sj_g37_033_p7 , g00279_sj_g37_083_p7 , g00279_sj_g37_133_p7
TS28: meninges Present Regionally restricted g00279_sj_g37_083_p7 , g00279_sj_g37_133_p7 , g00279_sj_g37_033_p7
TS28: midbrain Present Widespread g00279_sj_g37_133_p7 , g00279_sj_g37_033_p7 , g00279_sj_g37_083_p7
TS28: main olfactory bulb Present Widespread g00279_sj_g37_133_p7 , g00279_sj_g37_083_p7 , g00279_sj_g37_033_p7
TS28: retina Present Regionally restricted g00279_sj_g37_083_p7 , g00279_sj_g37_033_p7 , g00279_sj_g37_133_p7
TS28: spinal cord Present Widespread g00279_sj_g37_083_p7 , g00279_sj_g37_033_p7 , g00279_sj_g37_133_p7
TS28: thalamus Present Widespread g00279_sj_g37_133_p7 , g00279_sj_g37_033_p7 , g00279_sj_g37_083_p7
Specimen g00279 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00279_sj_g39_118_ads , g00279_sj_g39_018_ads , g00279_sj_g39_068_ads , g00279_sj_g42_051_adc , g00279_sj_g42_001_adc
TS28: basal ganglia Present Widespread g00279_sj_g39_068_ads , g00279_sj_g39_118_ads , g00279_sj_g39_018_ads , g00279_sj_g42_001_adc , g00279_sj_g42_051_adc
TS28: choroid plexus Present Regionally restricted g00279_sj_g42_051_adc , g00279_sj_g39_118_ads , g00279_sj_g39_068_ads , g00279_sj_g39_018_ads , g00279_sj_g42_001_adc
TS28: meninges Present Regionally restricted g00279_sj_g39_118_ads , g00279_sj_g42_051_adc , g00279_sj_g39_068_ads , g00279_sj_g39_018_ads , g00279_sj_g42_001_adc
TS28: midbrain Present Widespread g00279_sj_g42_001_adc , g00279_sj_g42_051_adc , g00279_sj_g39_018_ads , g00279_sj_g39_068_ads , g00279_sj_g39_118_ads
TS28: main olfactory bulb Present Regionally restricted g00279_sj_g42_051_adc , g00279_sj_g39_018_ads , g00279_sj_g39_118_ads , g00279_sj_g39_068_ads , g00279_sj_g42_001_adc Expression was region specific and scattered.
TS28: brainstem Strong Regionally restricted g00279_sj_g42_001_adc , g00279_sj_g42_051_adc , g00279_sj_g39_068_ads , g00279_sj_g39_018_ads , g00279_sj_g39_118_ads Expression was region specific and scattered.
TS28: cerebellum Strong Regionally restricted g00279_sj_g39_068_ads , g00279_sj_g42_051_adc , g00279_sj_g39_018_ads , g00279_sj_g42_001_adc , g00279_sj_g39_118_ads Expression was region specific and scattered.
TS28: cerebral cortex Strong Regionally restricted g00279_sj_g42_001_adc , g00279_sj_g39_068_ads , g00279_sj_g42_051_adc , g00279_sj_g39_118_ads , g00279_sj_g39_018_ads Expression was region specific and scattered.
TS28: hippocampus Strong Regionally restricted g00279_sj_g42_001_adc , g00279_sj_g39_018_ads , g00279_sj_g42_051_adc , g00279_sj_g39_118_ads , g00279_sj_g39_068_ads Expression was region specific and scattered.
TS28: hypothalamus Strong Regionally restricted g00279_sj_g42_051_adc , g00279_sj_g39_118_ads , g00279_sj_g42_001_adc , g00279_sj_g39_018_ads , g00279_sj_g39_068_ads Expression was region specific and scattered.
TS28: retina Strong Regionally restricted g00279_sj_g39_118_ads , g00279_sj_g42_001_adc , g00279_sj_g39_068_ads , g00279_sj_g39_018_ads , g00279_sj_g42_051_adc
TS28: spinal cord Strong Regionally restricted g00279_sj_g42_001_adc , g00279_sj_g39_018_ads , g00279_sj_g39_068_ads , g00279_sj_g42_051_adc , g00279_sj_g39_118_ads Expression was region specific and scattered.
TS28: thalamus Strong Regionally restricted g00279_sj_g39_118_ads , g00279_sj_g42_051_adc , g00279_sj_g39_018_ads , g00279_sj_g42_001_adc , g00279_sj_g39_068_ads Expression was region specific and scattered.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory