About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4944691
Gene symbol: Vps13a
Gene name: vacuolar protein sorting 13A
Probe: g00106
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g00106 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: midbrain Present Widespread g00106_sj_g37_009_e11 , g00106_sj_g37_059_e11
TS19: hindbrain Present Widespread g00106_sj_g37_009_e11 , g00106_sj_g37_059_e11
TS19: future spinal cord Present Widespread g00106_sj_g37_009_e11 , g00106_sj_g37_059_e11
TS19: telencephalon Present Widespread g00106_sj_g37_009_e11 , g00106_sj_g37_059_e11

Specimen g00106 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g00106_sj_g44_134_e15 , g00106_sj_g44_084_e15 , g00106_sj_g44_034_e15
TS23: hindbrain Present Widespread g00106_sj_g44_084_e15 , g00106_sj_g44_034_e15 , g00106_sj_g44_134_e15
TS23: hypothalamus Present Widespread g00106_sj_g44_034_e15 , g00106_sj_g44_084_e15 , g00106_sj_g44_134_e15
TS23: midbrain Present Widespread g00106_sj_g44_034_e15 , g00106_sj_g44_084_e15 , g00106_sj_g44_134_e15
TS23: retina Present Regionally restricted g00106_sj_g44_084_e15 , g00106_sj_g44_034_e15 , g00106_sj_g44_134_e15
TS23: spinal cord Present Regionally restricted g00106_sj_g44_034_e15 , g00106_sj_g44_084_e15 , g00106_sj_g44_134_e15 Expression was region specific and scattered.
TS23: ganglionic eminence Strong Regionally restricted g00106_sj_g44_134_e15 , g00106_sj_g44_034_e15 , g00106_sj_g44_084_e15 Expression was region specific and scattered.
TS23: hippocampus Strong Regionally restricted g00106_sj_g44_084_e15 , g00106_sj_g44_034_e15 , g00106_sj_g44_134_e15 Expression was region specific and scattered.
TS23: neocortex Strong Regionally restricted g00106_sj_g44_034_e15 , g00106_sj_g44_084_e15 , g00106_sj_g44_134_e15 Expression was region specific and scattered.
TS23: main olfactory bulb Strong Regionally restricted g00106_sj_g44_034_e15 , g00106_sj_g44_134_e15 , g00106_sj_g44_084_e15 Expression was region specific and scattered.

Specimen g00106 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00106_sj_g44_134_p7 , g00106_sj_g44_084_p7 , g00106_sj_g44_034_p7
TS28: basal ganglia Present Widespread g00106_sj_g44_134_p7 , g00106_sj_g44_034_p7 , g00106_sj_g44_084_p7
TS28: brainstem Present Widespread g00106_sj_g44_084_p7 , g00106_sj_g44_034_p7 , g00106_sj_g44_134_p7
TS28: cerebellum Present Widespread g00106_sj_g44_034_p7 , g00106_sj_g44_084_p7 , g00106_sj_g44_134_p7
TS28: cerebral cortex Present Widespread g00106_sj_g44_134_p7 , g00106_sj_g44_084_p7 , g00106_sj_g44_034_p7
TS28: choroid plexus Present Regionally restricted g00106_sj_g44_134_p7 , g00106_sj_g44_034_p7 , g00106_sj_g44_084_p7
TS28: hippocampus Present Regionally restricted g00106_sj_g44_134_p7 , g00106_sj_g44_034_p7 , g00106_sj_g44_084_p7 Expression was region specific and scattered.
TS28: hypothalamus Present Regionally restricted g00106_sj_g44_134_p7 , g00106_sj_g44_084_p7 , g00106_sj_g44_034_p7 Expression was region specific and scattered.
TS28: meninges Present Regionally restricted g00106_sj_g44_034_p7 , g00106_sj_g44_084_p7 , g00106_sj_g44_134_p7
TS28: midbrain Present Widespread g00106_sj_g44_134_p7 , g00106_sj_g44_034_p7 , g00106_sj_g44_084_p7
TS28: main olfactory bulb Present Widespread g00106_sj_g44_134_p7 , g00106_sj_g44_034_p7 , g00106_sj_g44_084_p7
TS28: retina Present Regionally restricted g00106_sj_g44_084_p7 , g00106_sj_g44_134_p7 , g00106_sj_g44_034_p7
TS28: spinal cord Present Widespread g00106_sj_g44_084_p7 , g00106_sj_g44_034_p7 , g00106_sj_g44_134_p7
TS28: thalamus Present Widespread g00106_sj_g44_134_p7 , g00106_sj_g44_034_p7 , g00106_sj_g44_084_p7

Specimen g00106 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00106_sj_g46_075_ads , g00106_sj_g46_025_ads , g00106_sj_g46_125_ads , g00106_sj_g1_065_adc , g00106_sj_g1_015_adc
TS28: basal ganglia Present Widespread g00106_sj_g46_025_ads , g00106_sj_g1_065_adc , g00106_sj_g1_015_adc , g00106_sj_g46_075_ads , g00106_sj_g46_125_ads
TS28: brainstem Present Widespread g00106_sj_g1_015_adc , g00106_sj_g46_125_ads , g00106_sj_g46_075_ads , g00106_sj_g46_025_ads , g00106_sj_g1_065_adc
TS28: cerebral cortex Present Widespread g00106_sj_g46_075_ads , g00106_sj_g1_015_adc , g00106_sj_g46_025_ads , g00106_sj_g46_125_ads , g00106_sj_g1_065_adc
TS28: choroid plexus Present Regionally restricted g00106_sj_g46_025_ads , g00106_sj_g46_075_ads , g00106_sj_g1_015_adc , g00106_sj_g46_125_ads , g00106_sj_g1_065_adc
TS28: hypothalamus Present Regionally restricted g00106_sj_g1_065_adc , g00106_sj_g46_075_ads , g00106_sj_g1_015_adc , g00106_sj_g46_025_ads , g00106_sj_g46_125_ads Expression was region specific and scattered.
TS28: meninges Present Regionally restricted g00106_sj_g1_015_adc , g00106_sj_g46_075_ads , g00106_sj_g46_025_ads , g00106_sj_g46_125_ads , g00106_sj_g1_065_adc
TS28: midbrain Present Widespread g00106_sj_g46_025_ads , g00106_sj_g46_125_ads , g00106_sj_g1_015_adc , g00106_sj_g46_075_ads , g00106_sj_g1_065_adc
TS28: main olfactory bulb Present Regionally restricted g00106_sj_g46_075_ads , g00106_sj_g1_015_adc , g00106_sj_g46_125_ads , g00106_sj_g46_025_ads , g00106_sj_g1_065_adc Expression was region specific and scattered.
TS28: retina Present Regionally restricted g00106_sj_g1_065_adc , g00106_sj_g46_025_ads , g00106_sj_g1_015_adc , g00106_sj_g46_125_ads , g00106_sj_g46_075_ads
TS28: spinal cord Present Regionally restricted g00106_sj_g46_025_ads , g00106_sj_g1_065_adc , g00106_sj_g1_015_adc , g00106_sj_g46_125_ads , g00106_sj_g46_075_ads Expression was region specific and scattered.
TS28: thalamus Present Widespread g00106_sj_g46_075_ads , g00106_sj_g46_025_ads , g00106_sj_g1_065_adc , g00106_sj_g46_125_ads , g00106_sj_g1_015_adc
TS28: cerebellum Strong Regionally restricted g00106_sj_g46_025_ads , g00106_sj_g46_125_ads , g00106_sj_g1_015_adc , g00106_sj_g46_075_ads , g00106_sj_g1_065_adc Expression was region specific and scattered.
TS28: hippocampus Strong Regionally restricted g00106_sj_g1_065_adc , g00106_sj_g46_125_ads , g00106_sj_g46_075_ads , g00106_sj_g46_025_ads , g00106_sj_g1_015_adc Expression was region specific and scattered.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/12/2024
MGI 6.23
The Jackson Laboratory