About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4944640
Gene symbol: Cxcl12
Gene name: C-X-C motif chemokine ligand 12
Probe: g00051
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g00051 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Scattered g00051_sj_g3_065_e11 , g00051_sj_g3_115_e11
TS19: midbrain Present Scattered g00051_sj_g3_065_e11 , g00051_sj_g3_115_e11
TS19: hindbrain Present Scattered g00051_sj_g3_115_e11 , g00051_sj_g3_065_e11
TS19: future spinal cord Present Scattered g00051_sj_g3_115_e11 , g00051_sj_g3_065_e11
TS19: telencephalon Present Scattered g00051_sj_g3_115_e11 , g00051_sj_g3_065_e11
Specimen g00051 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Regionally restricted g00051_sj_g3_065_e15 , g00051_sj_g3_115_e15 , g00051_sj_g3_015_e15 Expression was region specific and scattered.
TS23: ganglionic eminence Present Widespread g00051_sj_g3_065_e15 , g00051_sj_g3_015_e15 , g00051_sj_g3_115_e15
TS23: hindbrain Present Scattered g00051_sj_g3_015_e15 , g00051_sj_g3_065_e15 , g00051_sj_g3_115_e15
TS23: hippocampus Present Widespread g00051_sj_g3_065_e15 , g00051_sj_g3_115_e15 , g00051_sj_g3_015_e15
TS23: hypothalamus Present Scattered g00051_sj_g3_065_e15 , g00051_sj_g3_115_e15 , g00051_sj_g3_015_e15
TS23: midbrain Present Widespread g00051_sj_g3_015_e15 , g00051_sj_g3_115_e15 , g00051_sj_g3_065_e15
TS23: neocortex Present Widespread g00051_sj_g3_115_e15 , g00051_sj_g3_015_e15 , g00051_sj_g3_065_e15
TS23: spinal cord Present Regionally restricted g00051_sj_g3_115_e15 , g00051_sj_g3_065_e15 , g00051_sj_g3_015_e15 Expression was region specific and scattered.
TS23: main olfactory bulb Absent g00051_sj_g3_065_e15 , g00051_sj_g3_015_e15 , g00051_sj_g3_115_e15
TS23: retina Absent g00051_sj_g3_065_e15 , g00051_sj_g3_015_e15 , g00051_sj_g3_115_e15
Specimen g00051 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Scattered g00051_sj_g64_117_p7 , g00051_sj_g64_067_p7 , g00051_sj_g64_017_p7
TS28: basal ganglia Present Scattered g00051_sj_g64_067_p7 , g00051_sj_g64_017_p7 , g00051_sj_g64_117_p7
TS28: brainstem Present Scattered g00051_sj_g64_117_p7 , g00051_sj_g64_067_p7 , g00051_sj_g64_017_p7
TS28: cerebellum Present Regionally restricted g00051_sj_g64_117_p7 , g00051_sj_g64_017_p7 , g00051_sj_g64_067_p7 Expression was region specific and scattered.
TS28: cerebral cortex Present Scattered g00051_sj_g64_017_p7 , g00051_sj_g64_117_p7 , g00051_sj_g64_067_p7
TS28: choroid plexus Present Regionally restricted g00051_sj_g64_067_p7 , g00051_sj_g64_117_p7 , g00051_sj_g64_017_p7
TS28: hippocampus Present Scattered g00051_sj_g64_067_p7 , g00051_sj_g64_117_p7 , g00051_sj_g64_017_p7
TS28: hypothalamus Present Scattered g00051_sj_g64_067_p7 , g00051_sj_g64_117_p7 , g00051_sj_g64_017_p7
TS28: meninges Present Regionally restricted g00051_sj_g64_017_p7 , g00051_sj_g64_117_p7 , g00051_sj_g64_067_p7
TS28: midbrain Present Scattered g00051_sj_g64_067_p7 , g00051_sj_g64_017_p7 , g00051_sj_g64_117_p7
TS28: main olfactory bulb Present Scattered g00051_sj_g64_117_p7 , g00051_sj_g64_017_p7 , g00051_sj_g64_067_p7
TS28: retina Present Regionally restricted g00051_sj_g64_067_p7 , g00051_sj_g64_017_p7 , g00051_sj_g64_117_p7 Expression was region specific and scattered.
TS28: spinal cord Present Widespread g00051_sj_g64_067_p7 , g00051_sj_g64_117_p7 , g00051_sj_g64_017_p7
TS28: thalamus Present Scattered g00051_sj_g64_017_p7 , g00051_sj_g64_067_p7 , g00051_sj_g64_117_p7
Specimen g00051 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00051_sj_g87_098_adc , g00051_sj_g83_048_ads , g00051_sj_g83_148_ads , g00051_sj_g87_048_adc , g00051_sj_g83_098_ads
TS28: basal ganglia Present Widespread g00051_sj_g87_048_adc , g00051_sj_g83_048_ads , g00051_sj_g87_098_adc , g00051_sj_g83_098_ads , g00051_sj_g83_148_ads
TS28: brainstem Present Widespread g00051_sj_g87_048_adc , g00051_sj_g83_048_ads , g00051_sj_g83_098_ads , g00051_sj_g87_098_adc , g00051_sj_g83_148_ads
TS28: cerebellum Present Regionally restricted g00051_sj_g83_048_ads , g00051_sj_g87_048_adc , g00051_sj_g87_098_adc , g00051_sj_g83_098_ads , g00051_sj_g83_148_ads Expression was region specific and scattered.
TS28: cerebral cortex Present Widespread g00051_sj_g83_048_ads , g00051_sj_g83_098_ads , g00051_sj_g83_148_ads , g00051_sj_g87_048_adc , g00051_sj_g87_098_adc
TS28: choroid plexus Present Regionally restricted g00051_sj_g83_148_ads , g00051_sj_g87_048_adc , g00051_sj_g83_048_ads , g00051_sj_g83_098_ads , g00051_sj_g87_098_adc
TS28: hippocampus Present Regionally restricted g00051_sj_g87_098_adc , g00051_sj_g83_098_ads , g00051_sj_g83_148_ads , g00051_sj_g87_048_adc , g00051_sj_g83_048_ads Expression was region specific and scattered.
TS28: hypothalamus Present Widespread g00051_sj_g83_148_ads , g00051_sj_g83_098_ads , g00051_sj_g83_048_ads , g00051_sj_g87_098_adc , g00051_sj_g87_048_adc
TS28: midbrain Present Widespread g00051_sj_g87_048_adc , g00051_sj_g87_098_adc , g00051_sj_g83_098_ads , g00051_sj_g83_148_ads , g00051_sj_g83_048_ads
TS28: main olfactory bulb Present Widespread g00051_sj_g83_048_ads , g00051_sj_g83_148_ads , g00051_sj_g83_098_ads , g00051_sj_g87_098_adc , g00051_sj_g87_048_adc
TS28: retina Present Regionally restricted g00051_sj_g83_048_ads , g00051_sj_g87_048_adc , g00051_sj_g83_148_ads , g00051_sj_g83_098_ads , g00051_sj_g87_098_adc
TS28: spinal cord Present Regionally restricted g00051_sj_g83_148_ads , g00051_sj_g87_098_adc , g00051_sj_g83_098_ads , g00051_sj_g83_048_ads , g00051_sj_g87_048_adc Expression was region specific and scattered.
TS28: thalamus Present Widespread g00051_sj_g87_098_adc , g00051_sj_g83_148_ads , g00051_sj_g83_048_ads , g00051_sj_g87_048_adc , g00051_sj_g83_098_ads
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory