About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:122205 Little MH, et al., A high-resolution anatomical ontology of the developing murine genitourinary tract. Gene Expr Patterns. 2007 Jun;7(6):680-99
Assay type: RNA in situ
MGI Accession ID: MGI:4849497
Gene symbol: Col6a1
Gene name: collagen, type VI, alpha 1
Probe: GUDMAP Col6a1 probe
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 7B male WM: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: mesonephric mesenchyme of male Present 7B Col6a1 TS20 Male
TS20: nephric duct of male Present 7B Col6a1 TS20 Male
TS20: paramesonephric duct of male Present 7B Col6a1 TS20 Male
TS20: interstitium of the testis Present 7B Col6a1 TS20 Male
Specimen 7B female WM: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: mesonephric mesenchyme of female Present 7B Col6a1 TS20 Female
TS20: nephric duct of female Present 7B Col6a1 TS20 Female
TS20: paramesonephric duct of female Present 7B Col6a1 TS20 Female
TS20: mesenchymal stroma of ovary Present 7B Col6a1 TS20 Female
Specimen 7B male SISH: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: mesonephric mesenchyme of male Present 7B Col6a1 TS23 Male
TS23: interstitium of the testis Present 7B Col6a1 TS23 Male
Specimen 7B female SISH: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: mesonephric mesenchyme of female Present 7B Col6a1 TS23 Female
TS23: cortical component of mesenchymal stroma Present 7B Col6a1 TS23 Female
TS23: medullary component of mesenchymal stroma Present 7B Col6a1 TS23 Female
Specimen 7B male adult SISH: postnatal adult (more )
Structure Level Pattern Image Note
TS28: epididymis Absent 7B Col6a1 Adult Male
TS28: testis Absent 7B Col6a1 Adult Male
Specimen 7B female adult SISH: postnatal adult (more )
Structure Level Pattern Image Note
TS28: corpus luteum Present Regionally restricted 7B Col6a1 Adult Female Expression is present in the corpora lutea and theca cells of pre-antral and antral follicles.
TS28: ovary theca Present Regionally restricted 7B Col6a1 Adult Female Expression is present in the corpora lutea and theca cells of pre-antral and antral follicles.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory