Gene Expression Data
Assay Details
Assay
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Reference:
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J:145222
Hayashi A, et al., The role of brain-derived neurotrophic factor (BDNF)-induced XBP1 splicing during brain development. J Biol Chem. 2007 Nov 23;282(47):34525-34
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:4836957
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Gene symbol:
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Xbp1
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Gene name:
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X-box binding protein 1
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Probe:
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Xbp1 cDNA3
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Assay notes:
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The probe used in this assay recognizes both isoforms.
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Results
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Specimen
1A E18:
embryonic day 18.0
(more )
Specimen
1A E18:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 18.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS26: brain |
Present |
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1A E18
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Expression is present throughout.
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Specimen
1A P7:
postnatal day 7
(more )
Specimen
1A P7:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 7
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS28: cerebellum |
Present |
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1A P7
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: cerebral cortex |
Present |
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1A P7
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: corpus striatum |
Present |
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1A P7
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: hippocampus |
Present |
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1A P7
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: main olfactory bulb |
Present |
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1A P7
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: olfactory tubercle |
Present |
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1A P7
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: thalamus |
Present |
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1A P7
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies, such as the thalamic nuclei.
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Specimen
1A P21:
postnatal day 21
(more )
Specimen
1A P21:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 21
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: cerebellum |
Present |
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1A P21
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: cerebral cortex |
Present |
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1A P21
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: corpus striatum |
Present |
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1A P21
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: hippocampus |
Present |
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1A P21
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: main olfactory bulb |
Present |
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1A P21
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: olfactory tubercle |
Present |
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1A P21
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: thalamus |
Present |
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1A P21
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies, such as the thalamic nuclei.
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Specimen
1A P300:
postnatal day 300
(more )
Specimen
1A P300:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 300
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS28: cerebellum |
Present |
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1A P300
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: cerebral cortex |
Present |
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1A P300
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: corpus striatum |
Present |
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1A P300
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: hippocampus |
Present |
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1A P300
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: main olfactory bulb |
Present |
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1A P300
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: olfactory tubercle |
Present |
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1A P300
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
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TS28: thalamus |
Present |
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1A P300
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Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies, such as the thalamic nuclei.
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Specimen
1B P3:
postnatal day 3
(more )
Specimen
1B P3:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 3
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS27: hippocampus |
Present |
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1B P3
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This is the brain region most strongly labeled throughout the various developmental stages.
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Specimen
1B P7:
postnatal day 7
(more )
Specimen
1B P7:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 7
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: hippocampus |
Present |
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1B P7
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This is the brain region most strongly labeled throughout the various developmental stages.
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Specimen
1B P21:
postnatal day 21
(more )
Specimen
1B P21:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 21
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: hippocampus |
Present |
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1B P21
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This is the brain region most strongly labeled throughout the various developmental stages.
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Specimen
1B P300:
postnatal day 300
(more )
Specimen
1B P300:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 300
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Sex:
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Not Specified
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Type:
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section
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Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: hippocampus |
Present |
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1B P300
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This is the brain region most strongly labeled throughout the various developmental stages.
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Specimen
1C - cortex P7:
postnatal day 7
(more )
Specimen
1C - cortex P7:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 7
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Specimen
1C - cortex P21:
postnatal day 21
(more )
Specimen
1C - cortex P21:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 21
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Specimen
1C - cortex P300:
postnatal day 300
(more )
Specimen
1C - cortex P300:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 300
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Specimen
1C - hippocampus P7:
postnatal day 7
(more )
Specimen
1C - hippocampus P7:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 7
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Specimen
1C - hippocampus P21:
postnatal day 21
(more )
Specimen
1C - hippocampus P21:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 21
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Specimen
1C - hippocampus P300:
postnatal day 300
(more )
Specimen
1C - hippocampus P300:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 300
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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