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Gene Expression Data
Assay Details
Assay
Reference: J:145222 Hayashi A, et al., The role of brain-derived neurotrophic factor (BDNF)-induced XBP1 splicing during brain development. J Biol Chem. 2007 Nov 23;282(47):34525-34
Assay type: RNA in situ
MGI Accession ID: MGI:4836957
Gene symbol: Xbp1
Gene name: X-box binding protein 1
Probe: Xbp1 cDNA3
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: The probe used in this assay recognizes both isoforms.
Results
Specimen 1A E18: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: brain Present 1A E18 Expression is present throughout.

Specimen 1A P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cerebellum Present 1A P7 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: cerebral cortex Present 1A P7 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: corpus striatum Present 1A P7 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: hippocampus Present 1A P7 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: main olfactory bulb Present 1A P7 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: olfactory tubercle Present 1A P7 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: thalamus Present 1A P7 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies, such as the thalamic nuclei.

Specimen 1A P21: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebellum Present 1A P21 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: cerebral cortex Present 1A P21 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: corpus striatum Present 1A P21 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: hippocampus Present 1A P21 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: main olfactory bulb Present 1A P21 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: olfactory tubercle Present 1A P21 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: thalamus Present 1A P21 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies, such as the thalamic nuclei.

Specimen 1A P300: postnatal day 300 (more )
Structure Level Pattern Image Note
TS28: cerebellum Present 1A P300 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: cerebral cortex Present 1A P300 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: corpus striatum Present 1A P300 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: hippocampus Present 1A P300 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: main olfactory bulb Present 1A P300 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: olfactory tubercle Present 1A P300 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies.
TS28: thalamus Present 1A P300 Expression is preferentially present in the regions of the brain with abundant neuronal cell bodies, such as the thalamic nuclei.

Specimen 1B P3: postnatal day 3 (more )
Structure Level Pattern Image Note
TS27: hippocampus Present 1B P3 This is the brain region most strongly labeled throughout the various developmental stages.

Specimen 1B P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: hippocampus Present 1B P7 This is the brain region most strongly labeled throughout the various developmental stages.

Specimen 1B P21: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: hippocampus Present 1B P21 This is the brain region most strongly labeled throughout the various developmental stages.

Specimen 1B P300: postnatal day 300 (more )
Structure Level Pattern Image Note
TS28: hippocampus Present 1B P300 This is the brain region most strongly labeled throughout the various developmental stages.

Specimen 1C - cortex P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: frontal cortex Strong Regionally restricted 1C P7 cortex Expression is present the pyramidal neurons.

Specimen 1C - cortex P21: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: frontal cortex Present Regionally restricted 1C P21 cortex Expression is present the pyramidal neurons.

Specimen 1C - cortex P300: postnatal day 300 (more )
Structure Level Pattern Image Note
TS28: frontal cortex Present 1C P300 cortex

Specimen 1C - hippocampus P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: hippocampus CA3 Strong 1C P7 hip. CA3 There is strong expression in the pyramidal neurons.

Specimen 1C - hippocampus P21: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: hippocampus CA3 Present 1C P21 hip. CA3

Specimen 1C - hippocampus P300: postnatal day 300 (more )
Structure Level Pattern Image Note
TS28: hippocampus CA3 Present 1C P300 hip. CA3


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/21/2024
MGI 6.23
The Jackson Laboratory