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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4829242
Gene symbol: Xlr3a
Gene name: X-linked lymphocyte-regulated 3A
Probe: MGC clone 6120
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006613_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_006613_01
TS23: telencephalon Moderate Regionally restricted euxassay_006613_01
Specimen euxassay_006613_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_006613_02
TS23: trigeminal ganglion Moderate Single cells euxassay_006613_02
TS23: telencephalon Moderate Regionally restricted euxassay_006613_02
TS23: hindbrain Moderate Regionally restricted euxassay_006613_02
Specimen euxassay_006613_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_006613_03
TS23: trigeminal ganglion Moderate Single cells euxassay_006613_03
TS23: telencephalon Moderate Regionally restricted euxassay_006613_03
TS23: hindbrain Moderate Regionally restricted euxassay_006613_03
Specimen euxassay_006613_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_006613_04
TS23: trigeminal ganglion Moderate Single cells euxassay_006613_04
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_006613_04
TS23: ovary Moderate Regionally restricted euxassay_006613_04
TS23: telencephalon Moderate Regionally restricted euxassay_006613_04
TS23: hindbrain Moderate Regionally restricted euxassay_006613_04
TS23: midbrain Moderate Regionally restricted euxassay_006613_04
Specimen euxassay_006613_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_006613_05
TS23: trigeminal ganglion Weak Single cells euxassay_006613_05
TS23: glossopharyngeal ganglion Weak Single cells euxassay_006613_05
TS23: ovary Moderate Regionally restricted euxassay_006613_05
TS23: midbrain Moderate Regionally restricted euxassay_006613_05
TS23: hindbrain Moderate Regionally restricted euxassay_006613_05
TS23: telencephalon Moderate Regionally restricted euxassay_006613_05
TS23: diencephalon Moderate Regionally restricted euxassay_006613_05
Specimen euxassay_006613_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Weak Regionally restricted euxassay_006613_06
TS23: trigeminal ganglion Weak Single cells euxassay_006613_06
TS23: vestibulo-cochlear ganglion Weak Single cells euxassay_006613_06
TS23: glossopharyngeal ganglion Weak Single cells euxassay_006613_06
TS23: dorsal root ganglion Moderate Single cells euxassay_006613_06
TS23: midbrain Moderate Regionally restricted euxassay_006613_06
TS23: hindbrain Moderate Regionally restricted euxassay_006613_06
TS23: telencephalon Moderate Regionally restricted euxassay_006613_06
TS23: diencephalon Moderate Regionally restricted euxassay_006613_06
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006613_06
Specimen euxassay_006613_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_006613_07
TS23: hindbrain Moderate Regionally restricted euxassay_006613_07
TS23: midbrain Moderate Regionally restricted euxassay_006613_07
TS23: telencephalon Moderate Regionally restricted euxassay_006613_07
TS23: diencephalon Moderate Regionally restricted euxassay_006613_07
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006613_07
Specimen euxassay_006613_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_006613_08
TS23: dorsal root ganglion Moderate Single cells euxassay_006613_08
TS23: pancreas Weak Regionally restricted euxassay_006613_08
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006613_08
TS23: midbrain Moderate Regionally restricted euxassay_006613_08
TS23: hindbrain Moderate Regionally restricted euxassay_006613_08
TS23: telencephalon Moderate Regionally restricted euxassay_006613_08
TS23: diencephalon Moderate Regionally restricted euxassay_006613_08
Specimen euxassay_006613_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_006613_09
TS23: pancreas Weak Regionally restricted euxassay_006613_09
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006613_09
TS23: midbrain Moderate Regionally restricted euxassay_006613_09
TS23: hindbrain Moderate Regionally restricted euxassay_006613_09
TS23: telencephalon Moderate Regionally restricted euxassay_006613_09
TS23: diencephalon Moderate Regionally restricted euxassay_006613_09
Specimen euxassay_006613_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_006613_10
TS23: pancreas Weak Regionally restricted euxassay_006613_10
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006613_10
TS23: midbrain Moderate Regionally restricted euxassay_006613_10
TS23: hindbrain Moderate Regionally restricted euxassay_006613_10
TS23: telencephalon Moderate Regionally restricted euxassay_006613_10
TS23: diencephalon Moderate Regionally restricted euxassay_006613_10
Specimen euxassay_006613_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_006613_11
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006613_11
TS23: hindbrain Moderate Regionally restricted euxassay_006613_11
TS23: midbrain Moderate Regionally restricted euxassay_006613_11
TS23: diencephalon Moderate Regionally restricted euxassay_006613_11
TS23: telencephalon Moderate Regionally restricted euxassay_006613_11
Specimen euxassay_006613_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon Moderate Regionally restricted euxassay_006613_12
TS23: telencephalon Moderate Regionally restricted euxassay_006613_12
TS23: hindbrain Moderate Regionally restricted euxassay_006613_12
TS23: midbrain Moderate Regionally restricted euxassay_006613_12
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006613_12
Specimen euxassay_006613_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_006613_13
TS23: submandibular gland primordium Weak Regionally restricted euxassay_006613_13
TS23: trigeminal ganglion Weak Single cells euxassay_006613_13
TS23: glossopharyngeal ganglion Weak Single cells euxassay_006613_13
TS23: dorsal root ganglion Moderate Single cells euxassay_006613_13
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006613_13
TS23: midbrain Moderate Regionally restricted euxassay_006613_13
TS23: hindbrain Moderate Regionally restricted euxassay_006613_13
TS23: telencephalon Moderate Regionally restricted euxassay_006613_13
TS23: diencephalon Moderate Regionally restricted euxassay_006613_13
Specimen euxassay_006613_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_006613_14
TS23: submandibular gland primordium Weak Regionally restricted euxassay_006613_14
TS23: glossopharyngeal ganglion Weak Single cells euxassay_006613_14
TS23: trigeminal ganglion Weak Single cells euxassay_006613_14
TS23: dorsal root ganglion Moderate Single cells euxassay_006613_14
TS23: midbrain Moderate Regionally restricted euxassay_006613_14
TS23: telencephalon Moderate Regionally restricted euxassay_006613_14
TS23: hindbrain Moderate Regionally restricted euxassay_006613_14
Specimen euxassay_006613_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_006613_15
TS23: submandibular gland primordium Weak Regionally restricted euxassay_006613_15
TS23: trigeminal ganglion Weak Single cells euxassay_006613_15
TS23: hindbrain Moderate Regionally restricted euxassay_006613_15
TS23: telencephalon Moderate Regionally restricted euxassay_006613_15
Specimen euxassay_006613_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_006613_16
TS23: hindbrain Moderate Regionally restricted euxassay_006613_16
TS23: telencephalon Moderate Regionally restricted euxassay_006613_16
Specimen euxassay_006613_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_006613_17
TS23: trigeminal ganglion Moderate Single cells euxassay_006613_17
TS23: ovary Moderate Regionally restricted euxassay_006613_17
TS23: telencephalon Moderate Regionally restricted euxassay_006613_17
Specimen euxassay_006613_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_006613_18
TS23: neural retina Weak Regionally restricted euxassay_006613_18
TS23: ovary Moderate Regionally restricted euxassay_006613_18
TS23: telencephalon Moderate Regionally restricted euxassay_006613_18
Specimen euxassay_006613_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_006613_19
TS23: neural retina Weak Regionally restricted euxassay_006613_19
TS23: telencephalon Moderate Regionally restricted euxassay_006613_19
Specimen euxassay_006613_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_006613_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory