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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828219
Gene symbol: Slc39a1
Gene name: solute carrier family 39 (zinc transporter), member 1
Probe: MGC clone 6744
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004867_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_01
Specimen euxassay_004867_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_02
Specimen euxassay_004867_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_03
Specimen euxassay_004867_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_04
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004867_04
Specimen euxassay_004867_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_05
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004867_05
Specimen euxassay_004867_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_06
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004867_06
Specimen euxassay_004867_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_07
TS23: pons ventricular layer Moderate Uniform euxassay_004867_07
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004867_07
TS23: midbrain ventricular layer Moderate Uniform euxassay_004867_07
Specimen euxassay_004867_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_08
TS23: pons ventricular layer Moderate Uniform euxassay_004867_08
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004867_08
TS23: midbrain ventricular layer Moderate Uniform euxassay_004867_08
Specimen euxassay_004867_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_09
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_004867_09
TS23: pons ventricular layer Strong Uniform euxassay_004867_09
TS23: midbrain ventricular layer Moderate Uniform euxassay_004867_09
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_004867_09
Specimen euxassay_004867_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_10
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_004867_10
TS23: pons ventricular layer Strong Uniform euxassay_004867_10
TS23: midbrain ventricular layer Moderate Uniform euxassay_004867_10
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_004867_10
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_004867_10
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_004867_10
Specimen euxassay_004867_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Strong Uniform euxassay_004867_11
TS23: midbrain ventricular layer Moderate Uniform euxassay_004867_11
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_004867_11
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_004867_11
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_004867_11
Specimen euxassay_004867_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_12
TS23: pons ventricular layer Strong Uniform euxassay_004867_12
TS23: midbrain ventricular layer Moderate Uniform euxassay_004867_12
TS23: medulla oblongata basal plate ventricular layer Strong Uniform euxassay_004867_12
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_004867_12
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_004867_12
Specimen euxassay_004867_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_13
TS23: pons ventricular layer Strong Uniform euxassay_004867_13
TS23: midbrain ventricular layer Moderate Uniform euxassay_004867_13
TS23: medulla oblongata basal plate ventricular layer Strong Uniform euxassay_004867_13
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_004867_13
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_004867_13
TS23: thymus primordium Moderate Uniform euxassay_004867_13
Specimen euxassay_004867_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_004867_14
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_14
TS23: pons ventricular layer Moderate Uniform euxassay_004867_14
TS23: midbrain ventricular layer Moderate Uniform euxassay_004867_14
TS23: medulla oblongata basal plate ventricular layer Strong Uniform euxassay_004867_14
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_004867_14
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_004867_14
TS23: thymus primordium Moderate Uniform euxassay_004867_14
Specimen euxassay_004867_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_004867_15
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_15
TS23: pons ventricular layer Moderate Uniform euxassay_004867_15
TS23: midbrain ventricular layer Moderate Uniform euxassay_004867_15
TS23: medulla oblongata basal plate ventricular layer Strong Uniform euxassay_004867_15
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_004867_15
TS23: thymus primordium Moderate Uniform euxassay_004867_15
Specimen euxassay_004867_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_16
TS23: pons ventricular layer Moderate Uniform euxassay_004867_16
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004867_16
TS23: midbrain ventricular layer Moderate Uniform euxassay_004867_16
TS23: medulla oblongata basal plate ventricular layer Strong Uniform euxassay_004867_16
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_004867_16
TS23: thymus primordium Moderate Uniform euxassay_004867_16
Specimen euxassay_004867_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_17
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004867_17
TS23: pons ventricular layer Moderate Uniform euxassay_004867_17
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_004867_17
TS23: thymus primordium Moderate Uniform euxassay_004867_17
Specimen euxassay_004867_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_18
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004867_18
Specimen euxassay_004867_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_19
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004867_19
Specimen euxassay_004867_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_20
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004867_20
Specimen euxassay_004867_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_21
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004867_21
Specimen euxassay_004867_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004867_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory