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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828101
Gene symbol: Slc13a4
Gene name: solute carrier family 13 (sodium/sulfate symporters), member 4
Probe: T56032
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S6: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: choroid plexus Moderate
TS23: brain meninges Strong
Specimen euxassay_019711_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_04
Specimen euxassay_019711_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_05
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019711_05
Specimen euxassay_019711_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019711_06
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_06
Specimen euxassay_019711_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_07
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019711_07
TS23: lung Weak Regionally restricted euxassay_019711_07
Specimen euxassay_019711_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_08
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019711_08
TS23: lung Moderate Regionally restricted euxassay_019711_08
Specimen euxassay_019711_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_09
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019711_09
TS23: lung Moderate Regionally restricted euxassay_019711_09
Specimen euxassay_019711_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_10
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019711_10
TS23: lung Weak Regionally restricted euxassay_019711_10
Specimen euxassay_019711_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_11
TS23: lung Weak Regionally restricted euxassay_019711_11
Specimen euxassay_019711_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_12
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019711_12
TS23: lung Moderate Regionally restricted euxassay_019711_12
TS23: urethra Weak Regionally restricted euxassay_019711_12 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
Specimen euxassay_019711_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_13
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019711_13
TS23: lung Weak Regionally restricted euxassay_019711_13
TS23: urethra Weak Regionally restricted euxassay_019711_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
Specimen euxassay_019711_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_14
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019711_14
TS23: lung Weak Regionally restricted euxassay_019711_14
Specimen euxassay_019711_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_15
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019711_15
Specimen euxassay_019711_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_16
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019711_16
TS23: lung Weak Regionally restricted euxassay_019711_16
Specimen euxassay_019711_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_17
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019711_17
TS23: lung Weak Regionally restricted euxassay_019711_17
Specimen euxassay_019711_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_18
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_019711_18
TS23: lung Weak Regionally restricted euxassay_019711_18
Specimen euxassay_019711_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_19
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_019711_19
TS23: lung Moderate Regionally restricted euxassay_019711_19
Specimen euxassay_019711_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_019711_20
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_20
TS23: lung Moderate Regionally restricted euxassay_019711_20
Specimen euxassay_019711_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_21
TS23: lung Weak Regionally restricted euxassay_019711_21
Specimen euxassay_019711_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_22
TS23: lung Weak Regionally restricted euxassay_019711_22
Specimen euxassay_019711_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019711_23
TS23: lung Weak Regionally restricted euxassay_019711_23
Specimen euxassay_019711_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019711_24
TS23: lung Moderate Regionally restricted euxassay_019711_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory