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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827981
Gene symbol: Serpina3m
Gene name: serine (or cysteine) peptidase inhibitor, clade A, member 3M
Probe: IMAGE clone 1888597
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006231_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_006231_01
Specimen euxassay_006231_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_006231_02
TS23: facial ganglion Moderate Single cells euxassay_006231_02
Specimen euxassay_006231_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_006231_03
TS23: facial ganglion Moderate Single cells euxassay_006231_03
Specimen euxassay_006231_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_006231_04
TS23: pons mantle layer Strong Single cells euxassay_006231_04 trigeminal motor nucleus
Specimen euxassay_006231_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_006231_05
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_006231_05 facial motor nucleus
Specimen euxassay_006231_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_006231_06
TS23: thymus primordium Strong Single cells euxassay_006231_06
TS23: dorsal root ganglion Strong Single cells euxassay_006231_06
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006231_06 motor nucleus
Specimen euxassay_006231_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thymus primordium Strong Single cells euxassay_006231_07
TS23: dorsal root ganglion Strong Single cells euxassay_006231_07
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006231_07 motor nucleus
Specimen euxassay_006231_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Single cells euxassay_006231_08
Specimen euxassay_006231_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Single cells euxassay_006231_09
Specimen euxassay_006231_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Single cells euxassay_006231_10
Specimen euxassay_006231_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_006231_11 facial motor nucleus
TS23: dorsal root ganglion Strong Single cells euxassay_006231_11
TS23: axial skeleton tail region Strong Regionally restricted euxassay_006231_11
Specimen euxassay_006231_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_006231_12 facial motor nucleus
TS23: dorsal root ganglion Strong Single cells euxassay_006231_12
TS23: axial skeleton tail region Strong Regionally restricted euxassay_006231_12
Specimen euxassay_006231_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Single cells euxassay_006231_13
Specimen euxassay_006231_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Single cells euxassay_006231_14
TS23: pons mantle layer Strong Single cells euxassay_006231_14 trigeminal motor nucleus
Specimen euxassay_006231_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_006231_15
Specimen euxassay_006231_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_006231_16
Specimen euxassay_006231_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_006231_17
TS23: facial ganglion Moderate Single cells euxassay_006231_17
Specimen euxassay_006231_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_006231_18
Specimen euxassay_006231_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_006231_19
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory