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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827938
Gene symbol: Sel1l3
Gene name: sel-1 suppressor of lin-12-like 3 (C. elegans)
Probe: IMAGE clone 876859
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_002775_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_02
Specimen euxassay_002775_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002775_03
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_03
Specimen euxassay_002775_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002775_04
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_04
Specimen euxassay_002775_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002775_05
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_05
Specimen euxassay_002775_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002775_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_002775_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_002775_06
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_06
Specimen euxassay_002775_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_002775_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_002775_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002775_07
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002775_07
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_07
TS23: midgut Moderate Regionally restricted euxassay_002775_07
TS23: stomach Moderate Regionally restricted euxassay_002775_07
Specimen euxassay_002775_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002775_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002775_08
TS23: renal cortex Moderate Regionally restricted euxassay_002775_08
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_08
TS23: stomach Moderate Regionally restricted euxassay_002775_08
TS23: midgut Moderate Regionally restricted euxassay_002775_08
Specimen euxassay_002775_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002775_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002775_09
TS23: renal cortex Moderate Regionally restricted euxassay_002775_09
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002775_09
Specimen euxassay_002775_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002775_10
TS23: renal cortex Moderate Regionally restricted euxassay_002775_10
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_10
TS23: olfactory cortex marginal layer Strong Uniform euxassay_002775_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002775_10
TS23: midgut Moderate Regionally restricted euxassay_002775_10
Specimen euxassay_002775_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal cortex Moderate Regionally restricted euxassay_002775_11
TS23: olfactory cortex marginal layer Strong Uniform euxassay_002775_11
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002775_11
TS23: midgut Moderate Regionally restricted euxassay_002775_11
Specimen euxassay_002775_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal cortex Moderate Regionally restricted euxassay_002775_12
TS23: olfactory cortex marginal layer Strong Uniform euxassay_002775_12
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002775_12
TS23: midgut Weak Regionally restricted euxassay_002775_12
Specimen euxassay_002775_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002775_13
Specimen euxassay_002775_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: urethra Moderate Regionally restricted euxassay_002775_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: nephric duct of male Moderate Regionally restricted euxassay_002775_14
TS23: midgut Weak Regionally restricted euxassay_002775_14
TS23: hindgut Weak Regionally restricted euxassay_002775_14
Specimen euxassay_002775_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Uniform euxassay_002775_15
TS23: rectum Moderate Regionally restricted euxassay_002775_15
TS23: urethra Moderate Regionally restricted euxassay_002775_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: nephric duct of male Moderate Regionally restricted euxassay_002775_15
TS23: midgut Weak Regionally restricted euxassay_002775_15
TS23: hindgut Weak Regionally restricted euxassay_002775_15
Specimen euxassay_002775_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Uniform euxassay_002775_16
TS23: urethra Moderate Regionally restricted euxassay_002775_16 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: midgut Weak Regionally restricted euxassay_002775_16
TS23: hindgut Weak Regionally restricted euxassay_002775_16
TS23: foregut-midgut junction Weak Regionally restricted euxassay_002775_16
Specimen euxassay_002775_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002775_17
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002775_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002775_17
TS23: midgut Weak Regionally restricted euxassay_002775_17
TS23: foregut-midgut junction Weak Regionally restricted euxassay_002775_17
Specimen euxassay_002775_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002775_18
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002775_18
TS23: renal cortex Moderate Regionally restricted euxassay_002775_18
TS23: olfactory cortex marginal layer Strong Uniform euxassay_002775_18
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002775_18
Specimen euxassay_002775_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002775_19
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002775_19
TS23: renal cortex Moderate Regionally restricted euxassay_002775_19
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002775_19
Specimen euxassay_002775_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002775_20
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002775_20
TS23: renal cortex Weak Regionally restricted euxassay_002775_20
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_20
Specimen euxassay_002775_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002775_21
TS23: renal cortex Moderate Regionally restricted euxassay_002775_21
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_21
Specimen euxassay_002775_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal cortex Moderate Regionally restricted euxassay_002775_22
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_22
Specimen euxassay_002775_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_23
Specimen euxassay_002775_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Uniform euxassay_002775_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/16/2024
MGI 6.23 		The Jackson Laboratory