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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827917
Gene symbol: Scyl1
Gene name: SCY1-like 1 (S. cerevisiae)
Probe: MGC clone 18927
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003377_01: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_003377_01 perichondrium
TS23: otic capsule Weak Regionally restricted euxassay_003377_01
Specimen euxassay_003377_02: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_003377_02 perichondrium
TS23: otic capsule Weak Regionally restricted euxassay_003377_02
Specimen euxassay_003377_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_003377_03 perichondrium
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003377_03
TS23: otic capsule Weak Regionally restricted euxassay_003377_03
Specimen euxassay_003377_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_003377_04 perichondrium
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003377_04
TS23: otic capsule Weak Regionally restricted euxassay_003377_04
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003377_04
Specimen euxassay_003377_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_003377_05 perichondrium
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003377_05
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003377_05
Specimen euxassay_003377_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_003377_06 perichondrium
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003377_06
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003377_06
Specimen euxassay_003377_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_003377_07 perichondrium
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003377_07
TS23: lower jaw mesenchyme Moderate Regionally restricted euxassay_003377_07
TS23: palatal shelf Moderate Regionally restricted euxassay_003377_07
Specimen euxassay_003377_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_003377_08 perichondrium
TS23: otic capsule Weak Regionally restricted euxassay_003377_08
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003377_08
TS23: palatal shelf Moderate Regionally restricted euxassay_003377_08
TS23: lower jaw mesenchyme Moderate Regionally restricted euxassay_003377_08
TS23: pons mantle layer Weak Regionally restricted euxassay_003377_08 trigeminal motor nucleus
Specimen euxassay_003377_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_003377_09 perichondrium
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003377_09
TS23: palatal shelf Moderate Regionally restricted euxassay_003377_09
TS23: lower jaw mesenchyme Moderate Regionally restricted euxassay_003377_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_003377_09 facial motor nucleus
Specimen euxassay_003377_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003377_10
TS23: hyoid Moderate Regionally restricted euxassay_003377_10 perichondrium
TS23: palatal shelf Moderate Regionally restricted euxassay_003377_10
TS23: lower jaw mesenchyme Moderate Regionally restricted euxassay_003377_10
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_003377_10 facial motor nucleus
Specimen euxassay_003377_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003377_11
TS23: hyoid Moderate Regionally restricted euxassay_003377_11 perichondrium
TS23: palatal shelf Moderate Regionally restricted euxassay_003377_11
TS23: lower jaw mesenchyme Moderate Regionally restricted euxassay_003377_11
Specimen euxassay_003377_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_003377_15 facial motor nucleus
Specimen euxassay_003377_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_003377_16 facial motor nucleus
Specimen euxassay_003377_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: hyoid Moderate Regionally restricted euxassay_003377_17 perichondrium
TS23: pons mantle layer Weak Regionally restricted euxassay_003377_17 trigeminal motor nucleus
Specimen euxassay_003377_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_003377_18 perichondrium
TS23: hyoid Moderate Regionally restricted euxassay_003377_18 perichondrium
TS23: palatal shelf Moderate Regionally restricted euxassay_003377_18
Specimen euxassay_003377_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_003377_19 perichondrium
TS23: otic capsule Weak Regionally restricted euxassay_003377_19
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003377_19
TS23: lower jaw mesenchyme Moderate Regionally restricted euxassay_003377_19
TS23: palatal shelf Moderate Regionally restricted euxassay_003377_19
Specimen euxassay_003377_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_003377_20 perichondrium
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003377_20
TS23: palatal shelf Moderate Regionally restricted euxassay_003377_20
TS23: lower jaw mesenchyme Moderate Regionally restricted euxassay_003377_20
Specimen euxassay_003377_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_003377_21 perichondrium
TS23: otic capsule Weak Regionally restricted euxassay_003377_21
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003377_21
TS23: palatal shelf Moderate Regionally restricted euxassay_003377_21
Specimen euxassay_003377_22: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_003377_22 perichondrium
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003377_22
TS23: otic capsule Weak Regionally restricted euxassay_003377_22
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003377_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory