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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827876
Gene symbol: Satb1
Gene name: special AT-rich sequence binding protein 1
Probe: MGC clone 18461
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003888_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Uniform euxassay_003888_01
TS23: epidermis Strong Regionally restricted euxassay_003888_01
Specimen euxassay_003888_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Uniform euxassay_003888_02
TS23: epidermis Strong Regionally restricted euxassay_003888_02
Specimen euxassay_003888_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003888_03
TS23: neural retina Weak Uniform euxassay_003888_03
TS23: epidermis Strong Regionally restricted euxassay_003888_03
Specimen euxassay_003888_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003888_04
TS23: facial ganglion Weak Regionally restricted euxassay_003888_04
TS23: neural retina Weak Uniform euxassay_003888_04
TS23: epidermis Strong Regionally restricted euxassay_003888_04
Specimen euxassay_003888_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003888_05
TS23: epidermis Strong Regionally restricted euxassay_003888_05
Specimen euxassay_003888_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003888_06
TS23: epidermis Strong Regionally restricted euxassay_003888_06
Specimen euxassay_003888_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003888_07
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_003888_07
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_003888_07
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003888_07
TS23: epidermis Strong Regionally restricted euxassay_003888_07
Specimen euxassay_003888_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003888_08
TS23: vagus ganglion Weak Regionally restricted euxassay_003888_08
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_003888_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003888_08
TS23: epidermis Strong Regionally restricted euxassay_003888_08
Specimen euxassay_003888_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_003888_09
TS23: vagus ganglion Weak Regionally restricted euxassay_003888_09
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003888_09
TS23: cervical ganglion Moderate Regionally restricted euxassay_003888_09
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_003888_09
TS23: pons marginal layer Moderate Regionally restricted euxassay_003888_09
TS23: epidermis Strong Regionally restricted euxassay_003888_09
Specimen euxassay_003888_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thoracic ganglion Moderate Regionally restricted euxassay_003888_10
TS23: pons marginal layer Strong Regionally restricted euxassay_003888_10
TS23: epidermis Strong Regionally restricted euxassay_003888_10
Specimen euxassay_003888_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Weak Uniform euxassay_003888_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003888_11
TS23: epidermis Strong Regionally restricted euxassay_003888_11
Specimen euxassay_003888_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Weak Uniform euxassay_003888_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003888_12
TS23: epidermis Strong Regionally restricted euxassay_003888_12
Specimen euxassay_003888_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Weak Uniform euxassay_003888_13
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003888_13
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_003888_13
TS23: pons marginal layer Strong Regionally restricted euxassay_003888_13
TS23: epidermis Strong Regionally restricted euxassay_003888_13
Specimen euxassay_003888_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003888_14
TS23: cervical ganglion Moderate Regionally restricted euxassay_003888_14
TS23: pons marginal layer Strong Regionally restricted euxassay_003888_14
TS23: epidermis Strong Regionally restricted euxassay_003888_14
Specimen euxassay_003888_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Weak Regionally restricted euxassay_003888_15
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003888_15
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_003888_15
TS23: cervical ganglion Moderate Regionally restricted euxassay_003888_15
TS23: epidermis Strong Regionally restricted euxassay_003888_15
Specimen euxassay_003888_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_003888_16
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003888_16
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_003888_16
TS23: epidermis Strong Regionally restricted euxassay_003888_16
Specimen euxassay_003888_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003888_17
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_003888_17
TS23: epidermis Strong Regionally restricted euxassay_003888_17
Specimen euxassay_003888_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003888_18
TS23: facial ganglion Weak Regionally restricted euxassay_003888_18
TS23: epidermis Strong Regionally restricted euxassay_003888_18
Specimen euxassay_003888_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003888_19
TS23: facial ganglion Weak Regionally restricted euxassay_003888_19
TS23: epidermis Strong Regionally restricted euxassay_003888_19
Specimen euxassay_003888_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003888_20
TS23: neural retina Weak Uniform euxassay_003888_20
TS23: epidermis Strong Regionally restricted euxassay_003888_20
Specimen euxassay_003888_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Uniform euxassay_003888_21
TS23: epidermis Strong Regionally restricted euxassay_003888_21
Specimen euxassay_003888_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Uniform euxassay_003888_22
TS23: epidermis Strong Regionally restricted euxassay_003888_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory