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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827785
Gene symbol: Robo1
Gene name: roundabout guidance receptor 1
Probe: T36971
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009691_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_009691_03
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_03
Specimen euxassay_009691_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_009691_04
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_009691_04
TS23: vibrissa Weak Regionally restricted euxassay_009691_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_04
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_04
Specimen euxassay_009691_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_009691_05
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_009691_05
TS23: vibrissa Weak Regionally restricted euxassay_009691_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_05
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_05
Specimen euxassay_009691_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_009691_06
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009691_06
TS23: vibrissa Weak Regionally restricted euxassay_009691_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_06
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_06
Specimen euxassay_009691_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009691_07
TS23: vibrissa Weak Regionally restricted euxassay_009691_07
TS23: hindlimb digit 1 metatarsal Moderate Regionally restricted euxassay_009691_07
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_009691_07
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_009691_07
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_009691_07
TS23: tarsus Moderate Regionally restricted euxassay_009691_07
TS23: lower lip Weak Regionally restricted euxassay_009691_07
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_07
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_009691_07
Specimen euxassay_009691_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_009691_08
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_009691_08
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_009691_08
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_009691_08
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_009691_08
TS23: lower lip Weak Regionally restricted euxassay_009691_08
TS23: upper jaw molar Weak Regionally restricted euxassay_009691_08
TS23: lower jaw molar Weak Regionally restricted euxassay_009691_08
TS23: metanephros Weak Regionally restricted euxassay_009691_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_08
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_08
TS23: pons mantle layer Moderate Uniform euxassay_009691_08
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_009691_08
Specimen euxassay_009691_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: tarsus Moderate Regionally restricted euxassay_009691_09
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_009691_09
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_009691_09
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_009691_09
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_009691_09
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_009691_09
TS23: lower jaw molar Weak Regionally restricted euxassay_009691_09
TS23: lower lip Weak Regionally restricted euxassay_009691_09
TS23: metanephros Weak Regionally restricted euxassay_009691_09
TS23: adrenal gland Weak Regionally restricted euxassay_009691_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_09
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_09
TS23: pons mantle layer Moderate Uniform euxassay_009691_09
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_009691_09
TS23: midbrain mantle layer Moderate Uniform euxassay_009691_09
Specimen euxassay_009691_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: tarsus Weak Regionally restricted euxassay_009691_10
TS23: metanephros Weak Regionally restricted euxassay_009691_10
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009691_10
TS23: midgut Weak Regionally restricted euxassay_009691_10
TS23: adrenal gland Weak Regionally restricted euxassay_009691_10
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009691_10
TS23: pons mantle layer Moderate Uniform euxassay_009691_10
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_009691_10
TS23: midbrain mantle layer Moderate Uniform euxassay_009691_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009691_10
Specimen euxassay_009691_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Moderate Regionally restricted euxassay_009691_11
TS23: lower jaw incisor Moderate Regionally restricted euxassay_009691_11
TS23: metanephros Weak Regionally restricted euxassay_009691_11
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009691_11
TS23: midgut Weak Regionally restricted euxassay_009691_11
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_11
TS23: pons mantle layer Moderate Uniform euxassay_009691_11
TS23: midbrain mantle layer Moderate Uniform euxassay_009691_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009691_11
Specimen euxassay_009691_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_009691_12
TS23: palatal shelf Weak Regionally restricted euxassay_009691_12
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009691_12
TS23: nasal septum Weak Regionally restricted euxassay_009691_12
TS23: midgut Weak Regionally restricted euxassay_009691_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_12
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_009691_12
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009691_12
TS23: pons mantle layer Moderate Uniform euxassay_009691_12
TS23: midbrain mantle layer Moderate Uniform euxassay_009691_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009691_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_009691_12
Specimen euxassay_009691_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: palatal shelf Weak Regionally restricted euxassay_009691_13
TS23: nasal septum Weak Regionally restricted euxassay_009691_13
TS23: midgut Weak Regionally restricted euxassay_009691_13
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009691_13
TS23: pons mantle layer Moderate Uniform euxassay_009691_13
TS23: midbrain mantle layer Moderate Uniform euxassay_009691_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_009691_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009691_13
Specimen euxassay_009691_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_009691_14
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009691_14
TS23: midbrain mantle layer Moderate Uniform euxassay_009691_14
TS23: pons mantle layer Moderate Uniform euxassay_009691_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_009691_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009691_14
TS23: glans of male genital tubercle Weak Regionally restricted euxassay_009691_14
Specimen euxassay_009691_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_009691_15
TS23: upper jaw incisor Moderate Regionally restricted euxassay_009691_15
TS23: palatal shelf Weak Regionally restricted euxassay_009691_15
TS23: nasal septum Weak Regionally restricted euxassay_009691_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009691_15
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_15
TS23: pons mantle layer Moderate Uniform euxassay_009691_15
TS23: midbrain mantle layer Moderate Uniform euxassay_009691_15
TS23: ventral grey horn Moderate Regionally restricted euxassay_009691_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009691_15
TS23: glans of male genital tubercle Weak Regionally restricted euxassay_009691_15
Specimen euxassay_009691_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_009691_16
TS23: upper jaw incisor Moderate Regionally restricted euxassay_009691_16
TS23: palatal shelf Weak Regionally restricted euxassay_009691_16
TS23: nasal septum Weak Regionally restricted euxassay_009691_16
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_009691_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_16
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009691_16
TS23: pons mantle layer Moderate Uniform euxassay_009691_16
TS23: midbrain mantle layer Moderate Uniform euxassay_009691_16
TS23: ventral grey horn Moderate Regionally restricted euxassay_009691_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009691_16
Specimen euxassay_009691_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Weak Regionally restricted euxassay_009691_17
TS23: palatal shelf Weak Regionally restricted euxassay_009691_17
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009691_17
TS23: midgut Weak Regionally restricted euxassay_009691_17
TS23: adrenal gland Weak Regionally restricted euxassay_009691_17
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_009691_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_17
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009691_17
TS23: midbrain mantle layer Moderate Uniform euxassay_009691_17
TS23: pons mantle layer Moderate Uniform euxassay_009691_17
TS23: ventral grey horn Moderate Regionally restricted euxassay_009691_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009691_17
TS23: glans of male genital tubercle Weak Regionally restricted euxassay_009691_17
Specimen euxassay_009691_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower lip Weak Regionally restricted euxassay_009691_18
TS23: metanephros Weak Regionally restricted euxassay_009691_18
TS23: turbinate bone primordium Weak Regionally restricted euxassay_009691_18
TS23: adrenal gland Weak Regionally restricted euxassay_009691_18
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009691_18
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_18
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_009691_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_18
TS23: midbrain mantle layer Moderate Uniform euxassay_009691_18
TS23: pons mantle layer Moderate Uniform euxassay_009691_18
TS23: ventral grey horn Moderate Regionally restricted euxassay_009691_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009691_18
Specimen euxassay_009691_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_009691_19
TS23: lower lip Weak Regionally restricted euxassay_009691_19
TS23: metanephros Weak Regionally restricted euxassay_009691_19
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_19
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009691_19
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_009691_19
TS23: pons mantle layer Moderate Uniform euxassay_009691_19
TS23: midbrain mantle layer Moderate Uniform euxassay_009691_19
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009691_19
Specimen euxassay_009691_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_009691_20
TS23: lower lip Weak Regionally restricted euxassay_009691_20
TS23: upper jaw molar Weak Regionally restricted euxassay_009691_20
TS23: metanephros Weak Regionally restricted euxassay_009691_20
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009691_20
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_20
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_009691_20
TS23: pons mantle layer Moderate Uniform euxassay_009691_20
TS23: midbrain mantle layer Moderate Uniform euxassay_009691_20
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009691_20
Specimen euxassay_009691_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009691_21
TS23: vibrissa Weak Regionally restricted euxassay_009691_21
TS23: metanephros Weak Regionally restricted euxassay_009691_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_21
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_21
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_009691_21
TS23: midbrain mantle layer Moderate Uniform euxassay_009691_21
TS23: pons mantle layer Moderate Uniform euxassay_009691_21
Specimen euxassay_009691_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_009691_22
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009691_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_22
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_22
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_009691_22
Specimen euxassay_009691_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_009691_23
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_009691_23
TS23: tarsus Weak Regionally restricted euxassay_009691_23
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_23
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_23
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_009691_23
Specimen euxassay_009691_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_009691_24
TS23: tarsus Weak Regionally restricted euxassay_009691_24
TS23: hindlimb digit 1 phalanx Weak Regionally restricted euxassay_009691_24
TS23: hindlimb digit 1 metatarsal Weak Regionally restricted euxassay_009691_24
TS23: hindlimb digit 2 phalanx Weak Regionally restricted euxassay_009691_24
TS23: hindlimb digit 2 metatarsal Weak Regionally restricted euxassay_009691_24
TS23: hindlimb digit 3 metatarsal Weak Regionally restricted euxassay_009691_24
TS23: hindlimb digit 3 phalanx Weak Regionally restricted euxassay_009691_24
TS23: hindlimb digit 4 phalanx Weak Regionally restricted euxassay_009691_24
TS23: hindlimb digit 4 metatarsal Weak Regionally restricted euxassay_009691_24
TS23: hindlimb digit 5 metatarsal Weak Regionally restricted euxassay_009691_24
TS23: hindlimb digit 5 phalanx Weak Regionally restricted euxassay_009691_24
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009691_24
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009691_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory