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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827726
Gene symbol: Rhbdl1
Gene name: rhomboid like 1
Probe: MGC clone 28800
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003036_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Single cells euxassay_003036_01
Specimen euxassay_003036_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Single cells euxassay_003036_02
Specimen euxassay_003036_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Single cells euxassay_003036_03
Specimen euxassay_003036_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Single cells euxassay_003036_04
TS23: telencephalon marginal layer Moderate Single cells euxassay_003036_04
TS23: hindbrain Weak Uniform euxassay_003036_04
Specimen euxassay_003036_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Single cells euxassay_003036_05
TS23: telencephalon mantle layer Moderate Single cells euxassay_003036_05
TS23: midbrain Weak Uniform euxassay_003036_05
TS23: hindbrain Weak Uniform euxassay_003036_05
Specimen euxassay_003036_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Single cells euxassay_003036_06
TS23: telencephalon mantle layer Moderate Single cells euxassay_003036_06
TS23: midbrain Weak Uniform euxassay_003036_06
TS23: hindbrain Weak Uniform euxassay_003036_06
Specimen euxassay_003036_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Single cells euxassay_003036_07
TS23: telencephalon mantle layer Moderate Single cells euxassay_003036_07
TS23: midbrain Weak Uniform euxassay_003036_07
TS23: hindbrain Weak Uniform euxassay_003036_07
TS23: diencephalon Weak Uniform euxassay_003036_07
Specimen euxassay_003036_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Single cells euxassay_003036_08
TS23: telencephalon marginal layer Moderate Single cells euxassay_003036_08
TS23: midbrain Weak Uniform euxassay_003036_08
TS23: hindbrain Weak Uniform euxassay_003036_08
TS23: diencephalon Weak Uniform euxassay_003036_08
Specimen euxassay_003036_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Single cells euxassay_003036_09
TS23: telencephalon marginal layer Moderate Single cells euxassay_003036_09
TS23: spinal cord Weak Uniform euxassay_003036_09
TS23: midbrain Weak Uniform euxassay_003036_09
TS23: hindbrain Weak Uniform euxassay_003036_09
TS23: diencephalon Weak Uniform euxassay_003036_09
Specimen euxassay_003036_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Single cells euxassay_003036_10
TS23: telencephalon marginal layer Weak Single cells euxassay_003036_10
TS23: spinal cord Weak Uniform euxassay_003036_10
TS23: midbrain Weak Uniform euxassay_003036_10
TS23: hindbrain Weak Uniform euxassay_003036_10
TS23: diencephalon Weak Uniform euxassay_003036_10
Specimen euxassay_003036_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Weak Single cells euxassay_003036_11
TS23: telencephalon mantle layer Weak Single cells euxassay_003036_11
TS23: spinal cord Weak Uniform euxassay_003036_11
TS23: midbrain Weak Uniform euxassay_003036_11
TS23: hindbrain Weak Uniform euxassay_003036_11
TS23: diencephalon Weak Uniform euxassay_003036_11
Specimen euxassay_003036_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Weak Single cells euxassay_003036_12
TS23: telencephalon marginal layer Weak Single cells euxassay_003036_12
TS23: telencephalon mantle layer Weak Single cells euxassay_003036_12
TS23: spinal cord Weak Uniform euxassay_003036_12
TS23: midbrain Weak Uniform euxassay_003036_12
TS23: hindbrain Weak Uniform euxassay_003036_12
TS23: diencephalon Weak Uniform euxassay_003036_12
Specimen euxassay_003036_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Single cells euxassay_003036_13
TS23: telencephalon marginal layer Moderate Single cells euxassay_003036_13
TS23: telencephalon mantle layer Moderate Single cells euxassay_003036_13
TS23: spinal cord Weak Uniform euxassay_003036_13
TS23: midbrain Weak Uniform euxassay_003036_13
TS23: hindbrain Weak Uniform euxassay_003036_13
TS23: diencephalon Weak Uniform euxassay_003036_13
Specimen euxassay_003036_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Single cells euxassay_003036_14
TS23: telencephalon marginal layer Moderate Single cells euxassay_003036_14
TS23: telencephalon mantle layer Moderate Single cells euxassay_003036_14
TS23: spinal cord Weak Uniform euxassay_003036_14
TS23: midbrain Weak Uniform euxassay_003036_14
TS23: hindbrain Weak Uniform euxassay_003036_14
TS23: diencephalon Weak Uniform euxassay_003036_14
Specimen euxassay_003036_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Weak Single cells euxassay_003036_15
TS23: telencephalon mantle layer Weak Single cells euxassay_003036_15
TS23: spinal cord Weak Uniform euxassay_003036_15
TS23: midbrain Weak Uniform euxassay_003036_15
TS23: hindbrain Weak Uniform euxassay_003036_15
TS23: diencephalon Weak Uniform euxassay_003036_15
Specimen euxassay_003036_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Weak Single cells euxassay_003036_16
TS23: telencephalon marginal layer Weak Single cells euxassay_003036_16
TS23: telencephalon mantle layer Weak Single cells euxassay_003036_16
TS23: spinal cord Weak Uniform euxassay_003036_16
TS23: midbrain Weak Uniform euxassay_003036_16
TS23: hindbrain Weak Uniform euxassay_003036_16
TS23: diencephalon Weak Uniform euxassay_003036_16
Specimen euxassay_003036_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Single cells euxassay_003036_17
TS23: telencephalon marginal layer Moderate Single cells euxassay_003036_17
TS23: telencephalon mantle layer Moderate Single cells euxassay_003036_17
TS23: spinal cord Weak Uniform euxassay_003036_17
TS23: midbrain Weak Uniform euxassay_003036_17
TS23: hindbrain Weak Uniform euxassay_003036_17
TS23: diencephalon Weak Uniform euxassay_003036_17
Specimen euxassay_003036_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Weak Single cells euxassay_003036_18
TS23: telencephalon marginal layer Weak Single cells euxassay_003036_18
TS23: telencephalon mantle layer Weak Single cells euxassay_003036_18
TS23: hindbrain Weak Uniform euxassay_003036_18
TS23: midbrain Weak Uniform euxassay_003036_18
TS23: spinal cord Weak Uniform euxassay_003036_18
TS23: diencephalon Weak Uniform euxassay_003036_18
Specimen euxassay_003036_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Weak Single cells euxassay_003036_19
TS23: telencephalon mantle layer Weak Single cells euxassay_003036_19
TS23: telencephalon marginal layer Weak Single cells euxassay_003036_19
TS23: hindbrain Weak Uniform euxassay_003036_19
TS23: midbrain Weak Uniform euxassay_003036_19
TS23: diencephalon Weak Uniform euxassay_003036_19
Specimen euxassay_003036_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Weak Single cells euxassay_003036_20
TS23: telencephalon mantle layer Weak Single cells euxassay_003036_20
TS23: hindbrain Weak Uniform euxassay_003036_20
TS23: midbrain Weak Uniform euxassay_003036_20
TS23: diencephalon Weak Uniform euxassay_003036_20
Specimen euxassay_003036_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Weak Single cells euxassay_003036_21
TS23: telencephalon mantle layer Weak Single cells euxassay_003036_21
TS23: hindbrain Weak Uniform euxassay_003036_21
Specimen euxassay_003036_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Weak Single cells euxassay_003036_22
TS23: telencephalon mantle layer Weak Single cells euxassay_003036_22
Specimen euxassay_003036_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Weak Single cells euxassay_003036_23
TS23: telencephalon mantle layer Weak Single cells euxassay_003036_23
Specimen euxassay_003036_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Weak Single cells euxassay_003036_24
TS23: telencephalon mantle layer Weak Single cells euxassay_003036_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory