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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827642
Gene symbol: Rax
Gene name: retina and anterior neural fold homeobox
Probe: MGC clone 35992
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001277_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_001277_01
Specimen euxassay_001277_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_001277_02
Specimen euxassay_001277_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_001277_03
Specimen euxassay_001277_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_001277_04
Specimen euxassay_001277_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_001277_05
Specimen euxassay_001277_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_001277_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001277_06
Specimen euxassay_001277_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001277_07
Specimen euxassay_001277_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001277_08
Specimen euxassay_001277_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Weak Regionally restricted euxassay_001277_09
Specimen euxassay_001277_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_001277_12
Specimen euxassay_001277_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_001277_13
TS23: midbrain mantle layer Weak Regionally restricted euxassay_001277_13
Specimen euxassay_001277_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_001277_14
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_001277_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001277_14
Specimen euxassay_001277_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_001277_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001277_15
Specimen euxassay_001277_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001277_16
Specimen euxassay_001277_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_001277_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory