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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826031
Gene symbol: Ly6h
Gene name: lymphocyte antigen 6 family member H
Probe: T38301
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013816_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_01
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_01
TS23: neural retina Weak Regionally restricted euxassay_013816_01
Specimen euxassay_013816_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_02
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_02
TS23: trigeminal ganglion Weak Regionally restricted euxassay_013816_02
Specimen euxassay_013816_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_03
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013816_03
TS23: facial ganglion Moderate Regionally restricted euxassay_013816_03
Specimen euxassay_013816_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_04
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_04
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013816_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013816_04
TS23: facial ganglion Moderate Regionally restricted euxassay_013816_04
Specimen euxassay_013816_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_013816_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013816_05
TS23: facial ganglion Moderate Regionally restricted euxassay_013816_05
Specimen euxassay_013816_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_06
TS23: lateral ventricle Moderate Regionally restricted euxassay_013816_06
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013816_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013816_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_013816_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_013816_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013816_06
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_013816_06
Specimen euxassay_013816_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013816_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013816_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_013816_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_013816_07
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013816_07
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013816_07
TS23: trigeminal ganglion Weak Regionally restricted euxassay_013816_07
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_013816_07
TS23: olfactory epithelium Weak Regionally restricted euxassay_013816_07
TS23: dorsal root ganglion Weak Regionally restricted euxassay_013816_07
Specimen euxassay_013816_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013816_08
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_013816_08
TS23: midbrain mantle layer Weak Spotted euxassay_013816_08
TS23: pons mantle layer Weak Spotted euxassay_013816_08
TS23: rest of cerebellum mantle layer Weak Spotted euxassay_013816_08
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013816_08
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013816_08
TS23: trigeminal ganglion Weak Regionally restricted euxassay_013816_08
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_013816_08
TS23: olfactory epithelium Weak Regionally restricted euxassay_013816_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_013816_08
Specimen euxassay_013816_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_09
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_013816_09
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013816_09
TS23: midbrain mantle layer Weak Spotted euxassay_013816_09
TS23: pons mantle layer Weak Spotted euxassay_013816_09
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013816_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013816_09
TS23: ventral grey horn Weak Regionally restricted euxassay_013816_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_013816_09
Specimen euxassay_013816_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_013816_10
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013816_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_10
TS23: midbrain mantle layer Weak Spotted euxassay_013816_10
TS23: pons mantle layer Weak Spotted euxassay_013816_10
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013816_10
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013816_10
TS23: ventral grey horn Moderate Regionally restricted euxassay_013816_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_013816_10
TS23: vomeronasal organ Weak Regionally restricted euxassay_013816_10
TS23: dorsal root ganglion Weak Regionally restricted euxassay_013816_10
Specimen euxassay_013816_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_11
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013816_11
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_013816_11
TS23: midbrain mantle layer Weak Spotted euxassay_013816_11
TS23: pons mantle layer Weak Spotted euxassay_013816_11
TS23: ventral grey horn Weak Regionally restricted euxassay_013816_11
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013816_11
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013816_11
TS23: pituitary gland Weak Regionally restricted euxassay_013816_11
Specimen euxassay_013816_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_12
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_013816_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013816_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013816_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_013816_12
TS23: ventral grey horn Weak Regionally restricted euxassay_013816_12
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013816_12
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013816_12
TS23: pituitary gland Weak Regionally restricted euxassay_013816_12
Specimen euxassay_013816_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_13
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013816_13
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_013816_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013816_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_013816_13
TS23: ventral grey horn Weak Regionally restricted euxassay_013816_13
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013816_13
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013816_13
TS23: vomeronasal organ Moderate Regionally restricted euxassay_013816_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_013816_13
TS23: pituitary gland Weak Regionally restricted euxassay_013816_13
Specimen euxassay_013816_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_013816_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_14
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013816_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013816_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_013816_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_013816_14
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013816_14
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013816_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_013816_14
TS23: vomeronasal organ Moderate Regionally restricted euxassay_013816_14
TS23: pituitary gland Weak Regionally restricted euxassay_013816_14
Specimen euxassay_013816_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013816_15
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_15
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_013816_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013816_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_013816_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_013816_15
TS23: ventral grey horn Weak Regionally restricted euxassay_013816_15
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013816_15
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013816_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_013816_15
TS23: dorsal root ganglion Weak Regionally restricted euxassay_013816_15
TS23: pituitary gland Weak Regionally restricted euxassay_013816_15
Specimen euxassay_013816_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_013816_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013816_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_16
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_16
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013816_16
TS23: pons mantle layer Weak Regionally restricted euxassay_013816_16
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013816_16
TS23: ventral grey horn Weak Regionally restricted euxassay_013816_16
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013816_16
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013816_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_013816_16
TS23: dorsal root ganglion Weak Regionally restricted euxassay_013816_16
Specimen euxassay_013816_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013816_17
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013816_17
TS23: pons mantle layer Weak Regionally restricted euxassay_013816_17
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013816_17
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013816_17
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013816_17
TS23: trigeminal ganglion Weak Regionally restricted euxassay_013816_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_013816_17
Specimen euxassay_013816_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_18
TS23: pons mantle layer Weak Regionally restricted euxassay_013816_18
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013816_18
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013816_18
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013816_18
TS23: trigeminal ganglion Weak Regionally restricted euxassay_013816_18
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_013816_18
TS23: dorsal root ganglion Weak Regionally restricted euxassay_013816_18
Specimen euxassay_013816_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_19
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013816_19
TS23: pons mantle layer Weak Regionally restricted euxassay_013816_19
TS23: trigeminal ganglion Weak Regionally restricted euxassay_013816_19
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_013816_19
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_013816_19
TS23: dorsal root ganglion Weak Regionally restricted euxassay_013816_19
Specimen euxassay_013816_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_20
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013816_20
TS23: trigeminal ganglion Weak Regionally restricted euxassay_013816_20
TS23: facial ganglion Weak Regionally restricted euxassay_013816_20
Specimen euxassay_013816_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_21
TS23: trigeminal ganglion Weak Regionally restricted euxassay_013816_21
TS23: facial ganglion Weak Regionally restricted euxassay_013816_21
Specimen euxassay_013816_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_22
TS23: trigeminal ganglion Weak Regionally restricted euxassay_013816_22
TS23: neural retina Weak Regionally restricted euxassay_013816_22
Specimen euxassay_013816_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_013816_23
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_23
TS23: neural retina Weak Regionally restricted euxassay_013816_23
Specimen euxassay_013816_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013816_24
TS23: neural retina Weak Regionally restricted euxassay_013816_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory