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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823978
Gene symbol: Col15a1
Gene name: collagen, type XV, alpha 1
Probe: IMAGE clone 3156838
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_002783_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_01
Specimen euxassay_002783_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_002783_02
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_02
Specimen euxassay_002783_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_002783_03
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_03
Specimen euxassay_002783_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_04
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_04
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_002783_04
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_002783_04
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_002783_04
TS23: stomach Strong Regionally restricted euxassay_002783_04
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_04
Specimen euxassay_002783_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_002783_05
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_05
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002783_05
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_05
TS23: hindlimb digit 1 metatarsal Moderate Regionally restricted euxassay_002783_05
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_002783_05
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_002783_05
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_002783_05
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_002783_05
TS23: stomach Strong Regionally restricted euxassay_002783_05
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_05
Specimen euxassay_002783_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_002783_06
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_06
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002783_06
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_06
TS23: stomach Strong Regionally restricted euxassay_002783_06
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_06
Specimen euxassay_002783_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_002783_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002783_07
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_07
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002783_07
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_07
TS23: stomach Moderate Regionally restricted euxassay_002783_07
TS23: midgut Moderate Regionally restricted euxassay_002783_07
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_07
Specimen euxassay_002783_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_002783_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002783_08
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_08
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002783_08
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_08
TS23: midgut Moderate Regionally restricted euxassay_002783_08
TS23: stomach Moderate Regionally restricted euxassay_002783_08
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_002783_08
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_08
TS23: pericardium Strong Regionally restricted euxassay_002783_08
Specimen euxassay_002783_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_002783_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002783_09
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_09
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002783_09
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_09
TS23: midgut Moderate Regionally restricted euxassay_002783_09
TS23: stomach Moderate Regionally restricted euxassay_002783_09
TS23: metanephros Strong Regionally restricted euxassay_002783_09
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_002783_09
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_002783_09
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_09
TS23: pericardium Strong Regionally restricted euxassay_002783_09
Specimen euxassay_002783_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_002783_10
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002783_10
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_10
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002783_10
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_10
TS23: midgut Moderate Regionally restricted euxassay_002783_10
TS23: stomach Moderate Regionally restricted euxassay_002783_10
TS23: metanephros Strong Regionally restricted euxassay_002783_10
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_002783_10
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_002783_10
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_10
TS23: pericardium Strong Regionally restricted euxassay_002783_10
TS23: tongue muscle Moderate Regionally restricted euxassay_002783_10
Specimen euxassay_002783_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_11
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002783_11
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_11
TS23: midgut Moderate Regionally restricted euxassay_002783_11
TS23: metanephros Strong Regionally restricted euxassay_002783_11
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_002783_11
TS23: pelvic girdle skeleton Weak Regionally restricted euxassay_002783_11
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_11
TS23: pericardium Strong Regionally restricted euxassay_002783_11
TS23: tongue muscle Moderate Regionally restricted euxassay_002783_11
Specimen euxassay_002783_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_12
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002783_12
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_12
TS23: midgut Moderate Regionally restricted euxassay_002783_12
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_002783_12
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_12
TS23: pericardium Strong Regionally restricted euxassay_002783_12
TS23: tongue muscle Moderate Regionally restricted euxassay_002783_12
Specimen euxassay_002783_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_002783_13
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002783_13
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_13
TS23: midgut Moderate Regionally restricted euxassay_002783_13
TS23: nasal septum Moderate Regionally restricted euxassay_002783_13
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_13
TS23: pericardium Strong Regionally restricted euxassay_002783_13
TS23: bladder Moderate Regionally restricted euxassay_002783_13
TS23: tongue muscle Moderate Regionally restricted euxassay_002783_13
Specimen euxassay_002783_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_002783_14
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002783_14
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_14
TS23: midgut Moderate Regionally restricted euxassay_002783_14
TS23: hindgut Moderate Regionally restricted euxassay_002783_14
TS23: nasal septum Moderate Regionally restricted euxassay_002783_14
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_14
TS23: pericardium Strong Regionally restricted euxassay_002783_14
TS23: bladder Moderate Regionally restricted euxassay_002783_14
TS23: tongue muscle Moderate Regionally restricted euxassay_002783_14
Specimen euxassay_002783_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_002783_15
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002783_15
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_15
TS23: midgut Moderate Regionally restricted euxassay_002783_15
TS23: hindgut Moderate Regionally restricted euxassay_002783_15
TS23: nasal septum Moderate Regionally restricted euxassay_002783_15
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_15
TS23: pericardium Strong Regionally restricted euxassay_002783_15
TS23: bladder Moderate Regionally restricted euxassay_002783_15
TS23: tongue muscle Moderate Regionally restricted euxassay_002783_15
Specimen euxassay_002783_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_16
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002783_16
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_16
TS23: midgut Moderate Regionally restricted euxassay_002783_16
TS23: hindgut Moderate Regionally restricted euxassay_002783_16
TS23: nephric duct of male Moderate Regionally restricted euxassay_002783_16
TS23: pericardium Strong Regionally restricted euxassay_002783_16
TS23: bladder Moderate Regionally restricted euxassay_002783_16
TS23: tongue muscle Moderate Regionally restricted euxassay_002783_16
Specimen euxassay_002783_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002783_17
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_17
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002783_17
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_17
TS23: midgut Moderate Regionally restricted euxassay_002783_17
TS23: hindgut Moderate Regionally restricted euxassay_002783_17
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_002783_17
TS23: nephric duct of male Moderate Regionally restricted euxassay_002783_17
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_17
TS23: pericardium Strong Regionally restricted euxassay_002783_17
TS23: tongue muscle Moderate Regionally restricted euxassay_002783_17
Specimen euxassay_002783_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002783_18
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_18
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002783_18
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_18
TS23: midgut Moderate Regionally restricted euxassay_002783_18
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_002783_18
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_18
TS23: pericardium Strong Regionally restricted euxassay_002783_18
Specimen euxassay_002783_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002783_19
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_19
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002783_19
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_19
TS23: midgut Moderate Regionally restricted euxassay_002783_19
TS23: metanephros Strong Regionally restricted euxassay_002783_19
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_002783_19
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_002783_19
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_19
TS23: pericardium Strong Regionally restricted euxassay_002783_19
Specimen euxassay_002783_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002783_20
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_20
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_20
TS23: midgut Moderate Regionally restricted euxassay_002783_20
TS23: metanephros Strong Regionally restricted euxassay_002783_20
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_002783_20
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_20
Specimen euxassay_002783_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_002783_21
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_002783_21
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_002783_21
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_002783_21
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_21
Specimen euxassay_002783_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_002783_22
TS23: hindlimb digit 1 metatarsal Moderate Regionally restricted euxassay_002783_22
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_002783_22
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_002783_22
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_002783_22
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_002783_22
TS23: embryo mesenchyme Strong Regionally restricted euxassay_002783_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory