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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823806
Gene symbol: Cend1
Gene name: cell cycle exit and neuronal differentiation 1
Probe: MGC clone 35878
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001260_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_01
Specimen euxassay_001260_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cornea stroma Moderate Regionally restricted euxassay_001260_02
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_02
Specimen euxassay_001260_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_001260_03
TS23: cornea stroma Moderate Regionally restricted euxassay_001260_03
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_03
Specimen euxassay_001260_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_001260_04
TS23: facial ganglion Strong Regionally restricted euxassay_001260_04
TS23: cornea stroma Moderate Regionally restricted euxassay_001260_04
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_04
Specimen euxassay_001260_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_001260_05
TS23: facial ganglion Strong Regionally restricted euxassay_001260_05
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_001260_05
TS23: dorsal root ganglion Strong Regionally restricted euxassay_001260_05
TS23: cornea stroma Moderate Regionally restricted euxassay_001260_05
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_05
Specimen euxassay_001260_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_001260_06
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_001260_06
TS23: facial ganglion Strong Regionally restricted euxassay_001260_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_001260_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_001260_06
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_001260_06
Specimen euxassay_001260_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_001260_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_001260_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_001260_07
TS23: facial ganglion Strong Regionally restricted euxassay_001260_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_001260_07
TS23: spinal cord mantle layer Moderate Uniform euxassay_001260_07
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_001260_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001260_07
Specimen euxassay_001260_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_001260_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_001260_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_001260_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_001260_08
TS23: spinal cord mantle layer Moderate Uniform euxassay_001260_08
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001260_08
Specimen euxassay_001260_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_001260_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_001260_09
TS23: spinal cord mantle layer Moderate Uniform euxassay_001260_09
TS23: ventral grey horn Strong Regionally restricted euxassay_001260_09
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_09
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_001260_09
TS23: cervical ganglion Moderate Regionally restricted euxassay_001260_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001260_09
Specimen euxassay_001260_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_001260_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_001260_10
TS23: spinal cord mantle layer Moderate Uniform euxassay_001260_10
TS23: ventral grey horn Strong Regionally restricted euxassay_001260_10
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_001260_10
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_001260_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001260_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001260_10
Specimen euxassay_001260_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_001260_11
TS23: spinal cord mantle layer Moderate Uniform euxassay_001260_11
TS23: ventral grey horn Strong Regionally restricted euxassay_001260_11
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_001260_11
TS23: thoracic ganglion Moderate Regionally restricted euxassay_001260_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001260_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001260_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001260_11
Specimen euxassay_001260_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_001260_12
TS23: spinal cord mantle layer Moderate Uniform euxassay_001260_12
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_12
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001260_12
TS23: olfactory epithelium Weak Regionally restricted euxassay_001260_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001260_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001260_12
Specimen euxassay_001260_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Strong Regionally restricted euxassay_001260_13
TS23: spinal cord mantle layer Moderate Uniform euxassay_001260_13
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_13
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001260_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_001260_13
TS23: thoracic ganglion Moderate Regionally restricted euxassay_001260_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001260_13
TS23: urethra Moderate Regionally restricted euxassay_001260_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
Specimen euxassay_001260_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Strong Regionally restricted euxassay_001260_14
TS23: spinal cord mantle layer Moderate Uniform euxassay_001260_14
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_14
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001260_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_001260_14
TS23: thoracic ganglion Moderate Regionally restricted euxassay_001260_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_001260_14
TS23: urethra Weak Regionally restricted euxassay_001260_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
Specimen euxassay_001260_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_001260_15
TS23: ventral grey horn Strong Regionally restricted euxassay_001260_15
TS23: spinal cord mantle layer Moderate Uniform euxassay_001260_15
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_15
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001260_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_001260_15
TS23: thoracic ganglion Moderate Regionally restricted euxassay_001260_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001260_15
Specimen euxassay_001260_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_001260_16
TS23: ventral grey horn Strong Regionally restricted euxassay_001260_16
TS23: spinal cord mantle layer Moderate Uniform euxassay_001260_16
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_001260_16
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_001260_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001260_16
Specimen euxassay_001260_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_001260_17
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_17
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001260_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_001260_17
TS23: cervical ganglion Moderate Regionally restricted euxassay_001260_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_001260_17
TS23: urethra Strong Regionally restricted euxassay_001260_17 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
Specimen euxassay_001260_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_001260_18
TS23: vagus ganglion Strong Regionally restricted euxassay_001260_18
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_001260_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_001260_18
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_18
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001260_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_001260_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001260_18
Specimen euxassay_001260_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_001260_19
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_001260_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_001260_19
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_19
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001260_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_001260_19
Specimen euxassay_001260_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_001260_20
TS23: facial ganglion Strong Regionally restricted euxassay_001260_20
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_20
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001260_20
TS23: olfactory epithelium Moderate Regionally restricted euxassay_001260_20
Specimen euxassay_001260_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_001260_21
TS23: facial ganglion Strong Regionally restricted euxassay_001260_21
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_21
TS23: olfactory epithelium Weak Regionally restricted euxassay_001260_21
Specimen euxassay_001260_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_001260_22
TS23: facial ganglion Strong Regionally restricted euxassay_001260_22
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_22
Specimen euxassay_001260_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_001260_23
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_23
Specimen euxassay_001260_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cornea stroma Moderate Regionally restricted euxassay_001260_24
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001260_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory