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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822681
Gene symbol: Draxin
Gene name: dorsal inhibitory axon guidance protein
Probe: T35073
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006367_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_006367_01
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_006367_01
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006367_01
Specimen euxassay_006367_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_006367_02
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_006367_02
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006367_02
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_02
Specimen euxassay_006367_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_006367_03
TS23: trigeminal ganglion Weak Uniform euxassay_006367_03
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_03
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_03
TS23: pons Strong Regionally restricted euxassay_006367_03
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_03
Specimen euxassay_006367_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_006367_04
TS23: trigeminal ganglion Weak Uniform euxassay_006367_04
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_04
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_006367_04
TS23: pons ventricular layer Strong Regionally restricted euxassay_006367_04
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_04
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_04
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_04
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_04
Specimen euxassay_006367_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_006367_05
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_05
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_006367_05
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_05
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006367_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_05
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_05
Specimen euxassay_006367_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_006367_06
TS23: vestibulo-cochlear ganglion Weak Uniform euxassay_006367_06
TS23: glossopharyngeal ganglion Weak Uniform euxassay_006367_06
TS23: dorsal root ganglion Weak Regionally restricted euxassay_006367_06
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_06
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_006367_06
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_006367_06
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006367_06
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_06
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_06
Specimen euxassay_006367_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_006367_07
TS23: trigeminal ganglion Weak Uniform euxassay_006367_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006367_07
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_07
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_006367_07
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_006367_07
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_006367_07
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_07
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006367_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_07
Specimen euxassay_006367_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_006367_08
TS23: trigeminal ganglion Weak Uniform euxassay_006367_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006367_08
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_08
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_006367_08
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_006367_08
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_006367_08
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006367_08
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_08
Specimen euxassay_006367_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_006367_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006367_09
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_09
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_006367_09
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_006367_09
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_006367_09
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_09
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006367_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_09
Specimen euxassay_006367_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_10
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006367_10
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_006367_10
TS23: midbrain lateral wall Strong Regionally restricted euxassay_006367_10
TS23: diencephalon lateral wall Strong Regionally restricted euxassay_006367_10
TS23: spinal cord lateral wall Strong Regionally restricted euxassay_006367_10
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_10
TS23: medulla oblongata basal plate ventricular layer Strong Single cells euxassay_006367_10
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_10
Specimen euxassay_006367_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_006367_11
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_11
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006367_11
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_006367_11
TS23: midbrain lateral wall Strong Regionally restricted euxassay_006367_11
TS23: diencephalon lateral wall Strong Regionally restricted euxassay_006367_11
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_006367_11
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_11
TS23: medulla oblongata basal plate ventricular layer Strong Single cells euxassay_006367_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_11
Specimen euxassay_006367_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_006367_12
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_12
TS23: midbrain lateral wall Strong Regionally restricted euxassay_006367_12
TS23: diencephalon lateral wall Strong Regionally restricted euxassay_006367_12
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_006367_12
TS23: medulla oblongata basal plate ventricular layer Strong Single cells euxassay_006367_12
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_12
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_12
Specimen euxassay_006367_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_006367_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_13
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_13
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_006367_13
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_006367_13
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_13
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006367_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_13
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_13
Specimen euxassay_006367_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_14
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_006367_14
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006367_14
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_006367_14
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_006367_14
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_14
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006367_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_14
Specimen euxassay_006367_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_006367_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_15
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_15
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_006367_15
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006367_15
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_006367_15
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_006367_15
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006367_15
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_15
Specimen euxassay_006367_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_006367_16
TS23: glossopharyngeal ganglion Weak Uniform euxassay_006367_16
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_16
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_006367_16
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006367_16
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_006367_16
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_006367_16
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_16
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006367_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_16
Specimen euxassay_006367_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_006367_17
TS23: vestibulo-cochlear ganglion Moderate Uniform euxassay_006367_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_17
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_17
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006367_17
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_006367_17
TS23: midbrain meninges Moderate Regionally restricted euxassay_006367_17
TS23: diencephalon lateral wall Moderate Regionally restricted euxassay_006367_17
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_17
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006367_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_17
Specimen euxassay_006367_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_006367_18
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_18
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_18
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006367_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_006367_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006367_18
Specimen euxassay_006367_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_006367_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_19
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_19
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_19
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006367_19
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006367_19
Specimen euxassay_006367_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_006367_20
TS23: trigeminal ganglion Weak Uniform euxassay_006367_20
TS23: cerebral cortex Strong Regionally restricted euxassay_006367_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_20
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_006367_20
Specimen euxassay_006367_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_006367_21
TS23: trigeminal ganglion Weak Uniform euxassay_006367_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_21
TS23: cerebral cortex Moderate Regionally restricted euxassay_006367_21
Specimen euxassay_006367_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_006367_22
TS23: cerebral cortex Moderate Regionally restricted euxassay_006367_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006367_22
Specimen euxassay_006367_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_006367_23
TS23: cerebral cortex Moderate Regionally restricted euxassay_006367_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory