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Gene Expression Data
Assay Details
Assay
Reference: J:138806 Masuho I, et al., Dynamic expression patterns of G protein-regulated inducer of neurite outgrowth 1 (GRIN1) and its colocalization with Galphao implicate significant roles of Galphao-GRIN1 signaling in nervous system. Dev Dyn. 2008 Sep;237(9):2415-29
Assay type: RNA in situ
MGI Accession ID: MGI:4358545
Gene symbol: Gprin1
Gene name: G protein-regulated inducer of neurite outgrowth 1
Probe: GRIN1 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1A: embryonic day 8.5-9.0 (more )
Note: This is a dorsal view.
Structure Level Pattern Image Note
TS13: embryo Absent 1A

Specimen 1B: embryonic day 9.0-9.5 (more )
Note: This is lateral view.
Structure Level Pattern Image Note
TS14: embryo Absent 1B

Specimen 1C: embryonic day 10.0 (more )
Note: This is a lateral view.
Structure Level Pattern Image Note
TS16: cranial ganglion Present 1C
TS16: facio-acoustic ganglion complex Present 1C
TS16: glossopharyngeal ganglion Present 1C
TS16: trigeminal ganglion Present 1C
TS16: vagus ganglion Present 1C
TS16: dorsal root ganglion Present Regionally restricted 1C Expression is present at the trunk level.
TS16: future spinal cord Present Regionally restricted 1C Expression is present in the ventral domain.

Specimen 1D: embryonic day 11.0 (more )
Note: This is a lateral view.
Structure Level Pattern Image Note
TS18: midbrain Present Regionally restricted 1D Expression is present in the ventral midbrain.
TS18: future spinal cord Present 1D Areas of expression include the dorsolateral region.
TS18: dorsal root ganglion Present 1D
TS18: acoustic ganglion Present 1D
TS18: cranial ganglion Present 1D
TS18: facial ganglion Present 1D
TS18: glossopharyngeal ganglion Present 1D
TS18: trigeminal ganglion Present 1D

Specimen 1E: embryonic day 11.0 (more )
Note: This is a dorsolateral view.
Structure Level Pattern Image Note
TS18: cerebellum primordium Present 1E Expression is present in the caudal and rostral rhombic lip.

Specimen 1F: embryonic day 11.0 (more )
Note: This is a transverse section.
Structure Level Pattern Image Note
TS18: neural tube mantle layer Present Regionally restricted 1F Expression is present in the ventral horn.
TS18: dorsal root ganglion Present 1F

Specimen 2A: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: nervous system Present Regionally restricted 2A Expression is restricted to differentiating cell populations in the nervous system. It is not present in the ventricular zone, the neural crest generating zone, nor in any tissues or organs outside the nervous system.
TS20: telencephalon Strong Regionally restricted 2A There is no expression in the dorsal portion of the telencephalon.
TS20: diencephalon Strong 2A
TS20: cerebral cortex Absent 2A
TS20: cranial ganglion Present 2A
TS20: facial ganglion Present 2A
TS20: glossopharyngeal ganglion Present 2A
TS20: trigeminal ganglion Present 2A
TS20: spinal cord Present 2A

Specimen 2B: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: nervous system Present Regionally restricted 2B Expression is restricted to differentiating cell populations in the nervous system. It is not present in the ventricular zone, the neural crest generating zone, nor in any tissues or organs outside the nervous system.
TS20: diencephalon Present 2B
TS20: telencephalon Present 2B
TS20: vagus ganglion Present 2B
TS20: cranial ganglion Present 2B Expression is present in the cranial ganglia, including XI.
TS20: dorsal root ganglion Present 2B
TS20: spinal cord Present 2B

Specimen Not shown--E11.5: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: sympathetic ganglion Present

Specimen 2C: embryonic day 13.0 (more )
Structure Level Pattern Image Note
TS21: nervous system Present Regionally restricted 2C Expression is restricted to differentiating cell populations in the nervous system. It is not present in the ventricular zone, the neural crest generating zone, nor in any tissues or organs outside the nervous system.
TS21: spinal cord Present Regionally restricted 2C Expression is detected in the whole area of the spinal cord except for the ventricular zone.
TS21: spinal cord ventricular layer Absent 2C
TS21: telencephalon Present Regionally restricted 2C Expression is not present in the dorsal telencephalon.
TS21: diencephalon Present 2C
TS21: cranial ganglion Present 2C
TS21: facial ganglion Present 2C
TS21: glossopharyngeal ganglion Present 2C
TS21: trigeminal ganglion Present 2C
TS21: vestibulo-cochlear ganglion Present 2C

Specimen 2D: embryonic day 13.0 (more )
Structure Level Pattern Image Note
TS21: nervous system Present Regionally restricted 2D Expression is restricted to differentiating cell populations in the nervous system. It is not present in the ventricular zone, the neural crest generating zone, nor in any tissues or organs outside the nervous system.
TS21: spinal cord Present Regionally restricted 2D Expression is detected in the whole area of the spinal cord except for the ventricular zone.
TS21: spinal cord ventricular layer Absent 2D
TS21: olfactory lobe Present Regionally restricted 2D Expression is present in the olfactory bulb.
TS21: cranial ganglion Present 2D
TS21: vagus ganglion Present 2D
TS21: dorsal root ganglion Present 2D
TS21: sympathetic ganglion Present 2D
TS21: retina Moderate 2D

Specimen 2E: embryonic day 15.0 (more )
Structure Level Pattern Image Note
TS23: nervous system Present Regionally restricted 2E Expression is restricted to differentiating cell populations in the nervous system. It is not present in the ventricular zone, the neural crest generating zone, nor in any tissues or organs outside the nervous system.
TS23: telencephalon Present 2E Expression is present in the dorsal and ventral areas.
TS23: diencephalon Present 2E
TS23: cranial ganglion Present 2E
TS23: vestibulo-cochlear ganglion Present 2E
TS23: hindbrain Present 2E

Specimen 2F: embryonic day 15.0 (more )
Structure Level Pattern Image Note
TS23: nervous system Present Regionally restricted 2F Expression is restricted to differentiating cell populations in the nervous system. It is not present in the ventricular zone, the neural crest generating zone, nor in any tissues or organs outside the nervous system.
TS23: spinal cord Present Regionally restricted 2F Expression is detected in the whole area of the spinal cord except for the ventricular zone.
TS23: spinal cord ventricular layer Absent 2F
TS23: main olfactory bulb Present 2F
TS23: cranial ganglion Present 2F
TS23: vagus ganglion Present 2F
TS23: retina Moderate 2F
TS23: dorsal root ganglion Present 2F
TS23: sympathetic ganglion Present 2F

Specimen 3A: embryonic day 15.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS23: central nervous system Present Regionally restricted 3A Expression is present in differentiating fields.
TS23: main olfactory bulb Weak 3A
TS23: diencephalon Present Regionally restricted 3A Expression is present in the ventral region.
TS23: telencephalon Present Regionally restricted 3A Expression is present in the ventral region.
TS23: cerebral cortex Present Regionally restricted 3A Expression is present in the lateral, but not the medial, cerebral cortex.

Specimen 3B: embryonic day 15.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS23: central nervous system Present Regionally restricted 3B Expression is present in differentiating fields.
TS23: diencephalon Present Regionally restricted 3B Expression is present in the ventral region.
TS23: telencephalon Present Regionally restricted 3B Expression is present in the ventral region.
TS23: cerebral cortex Present Non-Uniform 3B Expression is present in the lateral, but not the medial, cerebral cortex; there is strong expression in the septum.
TS23: corpus striatum Strong 3B
TS23: piriform cortex Strong 3B
TS23: hippocampus Weak 3B

Specimen 3C: embryonic day 15.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS23: central nervous system Present Regionally restricted 3C Expression is present in differentiating fields.
TS23: diencephalon Present Regionally restricted 3C Expression is present in the ventral region.
TS23: telencephalon Present Regionally restricted 3C Expression is present in the ventral region.
TS23: thalamus Strong 3C
TS23: amygdala Weak 3C
TS23: hippocampus Weak 3C
TS23: hypothalamus Weak 3C

Specimen 3D: embryonic day 15.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS23: central nervous system Present Regionally restricted 3D Expression is present in differentiating fields.
TS23: cerebral cortex Present Regionally restricted 3D Expression is present in the lateral cerebral cortex.
TS23: thalamus Strong 3D
TS23: hippocampus Weak 3D
TS23: hypothalamus Weak 3D
TS23: midbrain Present 3D Expression is widely distributed.
TS23: midbrain tegmentum Moderate 3D

Specimen 3E: embryonic day 15.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS23: central nervous system Present Regionally restricted 3E Expression is present in differentiating fields.
TS23: superior colliculus Weak 3E
TS23: midbrain tegmentum Moderate 3E
TS23: pons Present Regionally restricted 3E Expression is present in the trigeminal motor nucleus.
TS23: midbrain Present 3E Expression is widely distributed.
TS23: hindbrain Present Regionally restricted 3E There is no expression in the ventricular zone.

Specimen 3F: embryonic day 15.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS23: central nervous system Present Regionally restricted 3F Expression is present in differentiating fields.
TS23: inferior colliculus Weak 3F
TS23: superior colliculus Weak 3F
TS23: cerebellum Moderate 3F
TS23: vestibulo-cochlear ganglion Strong 3F Expression is present in the cochlear nucleus.
TS23: midbrain Present 3F Expression is widely distributed.
TS23: hindbrain Present Regionally restricted 3F There is no expression in the ventricular zone.

Specimen 3G: embryonic day 15.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS23: central nervous system Present Regionally restricted 3G Expression is present in differentiating fields.
TS23: cerebellum Moderate 3G
TS23: hindbrain Present Regionally restricted 3G Expression is present in the hindbrain, including the precerebellar intramural migration and the posterior precerebellar extramural migration. There is no expression in the ventricular zone.
TS23: midbrain Present 3G Expression is widely distibuted.

Specimen 3H: embryonic day 15.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS23: central nervous system Present Regionally restricted 3H Expression is present in differentiating fields.
TS23: spinal cord Strong Regionally restricted 3H Expression is detected in the whole area of the spinal cord except for the ventricular zone.

Specimen Not shown--E14.5: embryonic day 15.0 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Absent
TS23: ganglionic eminence Absent
TS23: hindbrain ventricular layer Absent
TS23: midbrain ventricular layer Absent
TS23: spinal cord ventricular layer Absent
TS23: pons Present Non-Uniform There is moderate expression in portions of the pons. There is only trace expression in the anterior pons.
TS23: medulla oblongata Moderate
TS23: hindbrain Present Expression is present in yet-to-be identified nuclei.

Specimen 3I: embryonic day 17.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS25: central nervous system Present Regionally restricted 3I Expression is present in differentiating fields.
TS25: main olfactory bulb Present 3I
TS25: telencephalon Present Regionally restricted 3I Expression is present in almost all areas of the forebrain.
TS25: cerebral cortex Present 3I Expression is present in the medial and lateral cortex.

Specimen 3J: embryonic day 17.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS25: central nervous system Present Regionally restricted 3J Expression is present in differentiating fields.
TS25: telencephalon Present Regionally restricted 3J Expression is present in almost all areas of the forebrain.
TS25: cerebral cortex Present Non-Uniform 3J Expression is present in the cerebral cortex. There is strong expression in the septum.
TS25: corpus striatum Strong 3J
TS25: piriform cortex Strong 3J

Specimen 3K: embryonic day 17.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS25: central nervous system Present Regionally restricted 3K Expression is present in differentiating fields.
TS25: telencephalon Present Regionally restricted 3K Expression is present in almost all areas of the forebrain.
TS25: cerebral cortex Present 3K
TS25: thalamus Strong 3K
TS25: amygdala Moderate 3K
TS25: hypothalamus Moderate 3K
TS25: hippocampus Present 3K
TS25: olfactory lobe Present Regionally restricted 3K Expression is present in the lateral migratory stream and the nucleus of the lateral olfactory tract.

Specimen 3L: embryonic day 17.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS25: central nervous system Present Regionally restricted 3L Expression is present in differentiating fields.
TS25: amygdala Moderate 3L
TS25: hypothalamus Moderate 3L
TS25: hippocampus Present 3L
TS25: midbrain tegmentum Strong Regionally restricted 3L There is strong expression in the red nucleus.
TS25: periaqueductal grey Strong 3L
TS25: midbrain Present 3L

Specimen 3M: embryonic day 17.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS25: central nervous system Present Regionally restricted 3M Expression is present in differentiating fields.
TS25: inferior colliculus Moderate 3M
TS25: midbrain tegmentum Moderate 3M
TS25: superior colliculus Moderate 3M
TS25: pons Present Non-Uniform 3M Expression is present throughout the pons, including the anterior pons. There is strong expression in the pontine nucleus.
TS25: midbrain Present 3M
TS25: hindbrain Moderate Regionally restricted 3M There is no expression in the ventricular zone.

Specimen 3N: embryonic day 17.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS25: central nervous system Present Regionally restricted 3N Expression is present in differentiating fields.
TS25: inferior colliculus Moderate 3N
TS25: superior colliculus Moderate 3N
TS25: midbrain Present 3N Expression in the present in the midbrain, including in the tegmental nucleus.
TS25: pons Present Regionally restricted 3N Expression is present in the locus coeruleus, trigeminal nucleus complex, the facial motor nucleus, and the superior olivary nucleus.
TS25: vestibulo-cochlear ganglion Present 3N Expression is present in the cochlear nucleus.
TS25: hindbrain Moderate Regionally restricted 3N There is no expression in the ventricular zone.

Specimen 3O: embryonic day 17.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS25: central nervous system Present Regionally restricted 3O Expression is present in differentiating fields.
TS25: inferior colliculus Moderate 3O
TS25: cerebellum Moderate 3O
TS25: hindbrain Present Regionally restricted 3O Moderate expression is present in the hindbrain; strong expression is present in the anterior precerebellar extramural migration. There is no expression in the ventricular zone.

Specimen 3P: embryonic day 17.0 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS25: central nervous system Present Regionally restricted 3P Expression is present in differentiating fields.
TS25: spinal cord Strong Regionally restricted 3P Expression is detected in the whole area of the spinal cord except for the ventricular zone.
TS25: spinal cord ventricular layer Absent 3P

Specimen Not shown--E16.5: embryonic day 17.0 (more )
Structure Level Pattern Image Note
TS25: ganglionic eminence Absent
TS25: hindbrain ventricular layer Absent
TS25: midbrain ventricular layer Absent
TS25: telencephalon ventricular layer Absent

Specimen 4A: postnatal day 2 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS27: main olfactory bulb granule cell layer Strong 4A
TS27: main olfactory bulb mitral cell layer Strong 4A

Specimen 4B: postnatal day 2 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS27: forebrain Present Non-Uniform 4B Expression is strong in lateral and dorsal areas but is reduced in the ventral portion of the forebrain.
TS27: cerebral cortex Strong 4B
TS27: piriform cortex Strong 4B
TS27: corpus striatum Weak 4B
TS27: telencephalon septum Weak 4B

Specimen 4C: postnatal day 2 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS27: forebrain Present Non-Uniform 4C Expression is strong in lateral and dorsal areas but is reduced in the ventral portion of the forebrain.
TS27: amygdala Strong 4C
TS27: cerebral cortex Strong 4C
TS27: hippocampus Strong 4C
TS27: thalamus Strong 4C
TS27: hypothalamus Present Non-Uniform 4C Expression is high in the dorsal hypothalamus but is signficantly reduced in lateral and anterior hypothalamus.
TS27: paraventricular hypothalamic nucleus Strong 4C
TS27: zona incerta Strong 4C

Specimen 4D: postnatal day 2 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS27: hippocampus Strong 4D

Specimen 4E: postnatal day 2 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS27: cerebellum granule cell layer Weak 4E
TS27: pontine nucleus Strong 4E
TS27: midbrain tegmentum Weak 4E
TS27: periaqueductal grey Weak 4E
TS27: superior colliculus Weak 4E

Specimen 4F: postnatal day 2 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS27: cerebellum granule cell layer Weak 4F
TS27: inferior colliculus Weak 4F

Specimen 4G: postnatal day 2 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS27: cerebellum granule cell layer Weak 4G

Specimen 4H: postnatal day 2 (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS27: spinal cord Present 4H Expression levels are greaty reduced from what was seen before.

Specimen Not shown--P2: postnatal day 2 (more )
Structure Level Pattern Image Note
TS27: medulla oblongata Trace
TS27: pons Trace
TS27: brain ventricular layer Absent

Specimen 5A: postnatal adult (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS28: forebrain Present Regionally restricted 5A Expression is restricted to where newly born neurons are maturing.
TS28: main olfactory bulb granule cell layer Strong 5A
TS28: main olfactory bulb mitral cell layer Strong 5A

Specimen 5B: postnatal adult (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS28: forebrain Present Regionally restricted 5B Expression is restricted to where newly born neurons are maturing.
TS28: piriform cortex Strong 5B

Specimen 5C: postnatal adult (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS28: forebrain Present Regionally restricted 5C Expression is restricted to where newly born neurons are maturing.
TS28: hippocampal formation Strong 5C
TS28: cerebral cortex Weak 5C
TS28: amygdala Weak 5C
TS28: basolateral amygdaloid nucleus Weak 5C
TS28: lateral amygdaloid nucleus Weak 5C
TS28: medial amygdaloid nucleus Weak 5C
TS28: dentate gyrus Strong 5C

Specimen 5D: postnatal adult (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS28: dentate gyrus Strong 5D

Specimen 5E: postnatal adult (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS28: hindbrain Trace 5E Hardly any expression is detected.
TS28: midbrain Trace 5E Hardly any expression is detected.
TS28: cerebellum granule cell layer Weak 5E

Specimen 5F: postnatal adult (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS28: hindbrain Trace 5F Hardly any expression is detected.
TS28: midbrain Trace 5F Hardly any expression is detected.
TS28: cerebellum granule cell layer Weak 5F

Specimen 5G: postnatal adult (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS28: cerebellum granule cell layer Weak 5G
TS28: hindbrain Trace Regionally restricted 5G Hardly any expression is detected. No expression is detected in the ventricular zone of the fourth ventricle.

Specimen 5H: postnatal adult (more )
Note: This is a coronal section.
Structure Level Pattern Image Note
TS28: spinal cord Absent 5H Virtually no signal is detected.


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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory