Gene Expression Data
Assay Details
|
Assay
|
|
Reference:
|
J:93513
Plouhinec JL, et al., Identification of the mammalian Not gene via a phylogenomic approach. Gene Expr Patterns. 2004 Nov;5(1):11-22
|
|
Assay type:
|
RNA in situ
|
|
MGI Accession ID:
|
MGI:3834453
|
|
Gene symbol:
|
Noto
|
|
Gene name:
|
notochord homeobox
|
|
Probe:
|
Not cDNA
|
|
Probe preparation:
|
Antisense RNA
|
|
|
Results
|
Specimen
5A:
embryonic day 7.0
(more  )
Note: This is an early to midstreak stage embryo. This is a lateral view.
Specimen
5A:
(close  )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 7.0
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Note:
|
This is an early to midstreak stage embryo. This is a lateral view.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS9: embryo |
Present |
Regionally restricted |
5A
|
Expression is present in the epiblast at the anterior end of the developing primitive streak.
|
Specimen
5B:
embryonic day 7.25
(more )
Note: This is a midstreak stage embryo. This is a lateral view.
Specimen
5B:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 7.25
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Note:
|
This is a midstreak stage embryo. This is a lateral view.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS10: embryo |
Present |
Regionally restricted |
5B
|
Expression is present in the epiblast at the node level.
|
Specimen
5C:
embryonic day 7.5
(more )
Note: This is a late streak stage embryo. This is a lateral view.
Specimen
5C:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Note:
|
This is a late streak stage embryo. This is a lateral view.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS10: embryo |
Present |
Regionally restricted |
5C
|
Expression is present in the epiblast at the node level.
|
Specimen
5D:
embryonic day 7.75
(more )
Note: This is an early bud stage embryo. This is a lateral view.
Specimen
5D:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 7.75
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Note:
|
This is an early bud stage embryo. This is a lateral view.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS10: embryo |
Present |
Regionally restricted |
5D
|
Expression is present in the epiblast at the node level.
|
| TS10: mesendoderm |
Present |
Regionally restricted |
5D
|
Expression is present in the mesendodermal cell layer at the distal tip of the embryo.
|
Specimen
5E:
embryonic day 8.0
(more )
Note: This is an early headfold stage embryo. This is a lateral view.
Specimen
5E:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 8.0
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Note:
|
This is an early headfold stage embryo. This is a lateral view.
|
Specimen
5F:
embryonic day 7.0
(more )
Note: This is an early to midstreak stage embryo. This is a transverse section of the embryo shown in A.
Specimen
5F:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 7.0
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Note:
|
This is an early to midstreak stage embryo. This is a transverse section of the embryo shown in A.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS9: embryo |
Present |
Regionally restricted |
5F
|
Expression is present in the epiblast at the anterior end of the developing primitive streak.
|
Specimen
5G:
embryonic day 7.5
(more )
Note: This is a late streak stage embryo. This is a sagittal section.
Specimen
5G:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Note:
|
This is a late streak stage embryo. This is a sagittal section.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS10: embryo |
Present |
Regionally restricted |
5G
|
Expression is present in the epiblast at the node level.
|
Specimen
5H:
embryonic day 7.75
(more )
Note: This is an early bud stage embryo. This is a sagittal section.
Specimen
5H:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 7.75
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Note:
|
This is an early bud stage embryo. This is a sagittal section.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS10: embryo |
Present |
Regionally restricted |
5H
|
Expression is present at the epiblast at the node level.
|
| TS10: mesendoderm |
Present |
Regionally restricted |
5H
|
Expression is present in the mesendodermal cell layer at the distal tip of the embryo.
|
Specimen
5I:
embryonic day 8.0
(more )
Note: This is a late headfold stage embryo. This is a lateral view.
Specimen
5I:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 8.0
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Note:
|
This is a late headfold stage embryo. This is a lateral view.
|
Specimen
5J:
embryonic day 8.0
(more )
Note: This is a late headfold stage embryo. This is a sagittal section.
Specimen
5J:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 8.0
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Note:
|
This is a late headfold stage embryo. This is a sagittal section.
|
Specimen
5K/L:
embryonic day 8.0
(more )
Note: This is a 2-somite stage embryo. K is a lateral view, L is a ventral view of the same embryo.
Specimen
5K/L:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 8.0
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Note:
|
This is a 2-somite stage embryo. K is a lateral view, L is a ventral view of the same embryo.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS12: primitive streak |
Present |
Regionally restricted |
5L
,
5K
|
Expression is present in the node.
|
| TS12: notochord |
Present |
Regionally restricted |
5K
,
5L
|
The anterior limit of expression is at the level of the latest somites formed, meaning that it is progressively displaced posteriorly.
|
Specimen
5M/N:
embryonic day 8.5
(more )
Note: This is a 6-somite stage embryo. M is a lateral view, N is a posterior view of the same embryo.
Specimen
5M/N:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Note:
|
This is a 6-somite stage embryo. M is a lateral view, N is a posterior view of the same embryo.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS12: primitive streak |
Moderate |
Regionally restricted |
5N
,
5M
|
Expression is present in the node.
|
| TS12: notochord |
Present |
Regionally restricted |
5N
,
5M
|
The anterior limit of expression is at the level of the latest somites formed, meaning that it is progressively displaced posteriorly.
|
Specimen
5O:
embryonic day 8.5
(more )
Note: This is a 6-somite stage embryo. This is a transverse section of the embryo shown in M.
Specimen
5O:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Note:
|
This is a 6-somite stage embryo. This is a transverse section of the embryo shown in M.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS12: notochord |
Present |
|
5O
|
The anterior limit of expression is at the level of the latest somites formed, meaning that it is progressively displaced posteriorly.
|
Specimen
5P:
embryonic day 8.5
(more )
Note: This is a 6-somite stage embryo. This is a transverse section of the embryo shown in M.
Specimen
5P:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Note:
|
This is a 6-somite stage embryo. This is a transverse section of the embryo shown in M.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS12: notochord |
Present |
|
5P
|
The anterior limit of expression is at the level of the latest somites formed, meaning that it is progressively displaced posteriorly.
|
Specimen
5Q:
embryonic day 8.5
(more )
Note: This is a 6-somite stage embryo. This is a transverse section of the embryo shown in M.
Specimen
5Q:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Note:
|
This is a 6-somite stage embryo. This is a transverse section of the embryo shown in M.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS12: notochord |
Absent |
|
5Q
|
The anterior limit of expression is at the level of the latest somites formed, meaning that it is progressively displaced posteriorly.
|
Specimen
5R:
embryonic day 9.5
(more )
Note: This is a dorsal view.
Specimen
5R:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 9.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Note:
|
This is a dorsal view.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS15: notochord |
Present |
Regionally restricted |
5R
|
The anterior limit of expression is at the level of the latest somites formed, meaning that it is progressively displaced posteriorly.
|
| TS15: limb |
Absent |
|
5R
|
|
Specimen
Not shown:
embryonic day 10.5
(more )
Specimen
Not shown:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 10.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
Not Specified
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS17: tail |
Present |
|
|
Expression is present in the tail bud.
|
Specimen
Not shown:
embryonic day 15.0
(more )
Specimen
Not shown:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 15.0
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
Not Specified
|
Specimen
7A:
(close )
|
Genetic Background:
|
Not Specified
|
|
Mutant Allele(s):
|
Otx2tm1Pas/Otx2tm1Pas
|
|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Note:
|
This is a lateral view.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS11: notochordal plate |
Present |
Regionally restricted |
7A
|
Expression is present in the organizer region and the nascent notochord.
|
Specimen
7B:
(close )
|
Genetic Background:
|
Not Specified
|
|
Mutant Allele(s):
|
Foxa2tm1Jrt/Foxa2tm1Jrt
|
|
Age:
|
embryonic day 7.0
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Note:
|
This is a lateral view.
|
Specimen
Not shown:
(close )
|
Genetic Background:
|
Not Specified
|
|
Mutant Allele(s):
|
Nodaltm1Rob/Nodaltm1Rob
|
|
Age:
|
embryonic day 6.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
Not Specified
|
Specimen
7C:
(close )
|
Genetic Background:
|
Not Specified
|
|
Mutant Allele(s):
|
Nodaltm1Rob/Nodaltm1Rob
|
|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Note:
|
This is a lateral view.
|
Specimen
7D:
(close )
|
Genetic Background:
|
Not Specified
|
|
Mutant Allele(s):
|
Foxa2tm1Jrt/Foxa2tm1Jrt
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Note:
|
This is a lateral view.
|
Specimen
Not shown:
(close )
|
Genetic Background:
|
Not Specified
|
|
Mutant Allele(s):
|
Foxa2tm1Jrt/Foxa2tm1Jrt
|
|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
Not Specified
|
|
Analysis Tools