Gene Expression Data
Assay Details
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Assay
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Reference:
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J:134616
Ito K, et al., Semaphorin 3F confines ventral tangential migration of lateral olfactory tract neurons onto the telencephalon surface. J Neurosci. 2008 Apr 23;28(17):4414-22
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:3795488
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Gene symbol:
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Sema3f
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Gene name:
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sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
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Probe:
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Sema3f cDNA1
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Results
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Specimen
not shown:
embryonic day 10.5
(more  )
Specimen
not shown:
(close  )
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Genetic Background:
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ICR
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section
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Specimen
4A:
embryonic day 11.5
(more )
Specimen
4A:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Specimen
4C:
embryonic day 11.5
(more )
Specimen
4C:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: telencephalon mantle layer |
Present |
Regionally restricted |
4C
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Expression in the mantle region of the lateral and medial ganglionic eminence.
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| TS19: telencephalon |
Strong |
Regionally restricted |
4C
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Expression intensified caudally, especially strong in the dorsal margin of the lateral ganglionic eminence, surrounding the position of the future lateral olfactory tract.
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| TS19: telencephalon ventricular layer |
Absent |
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4C
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No expression in the ventricular zone.
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Specimen
4E:
embryonic day 11.5
(more )
Specimen
4E:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: telencephalon mantle layer |
Present |
Regionally restricted |
4E
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Expression in the mantle region of the lateral and medial ganglionic eminence.
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| TS19: telencephalon |
Strong |
Regionally restricted |
4E
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Expression intensified caudally, especially strong in the dorsal margin of the lateral ganglionic eminence, surrounding the position of the future lateral olfactory tract.
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| TS19: telencephalon ventricular layer |
Absent |
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4E
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No expression in the ventricular zone.
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Specimen
4B:
embryonic day 12.5
(more )
Specimen
4B:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: ganglionic eminence |
Present |
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4B
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Expression widened in parallel with the enlargement of the ganglionic eminence.
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Specimen
4D:
embryonic day 12.5
(more )
Specimen
4D:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: ganglionic eminence |
Present |
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4D
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Expression widened in parallel with the enlargement of the ganglionic eminence.
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| TS20: lateral ganglionic eminence |
Strong |
Regionally restricted |
4D
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Highest expression in the mantle region of the lateral ganglionic eminence, medial to the position of the lateral olfactory tract.
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| TS20: neocortex |
Present |
Regionally restricted |
4D
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Expression on the surface layer of the neocortex.
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| TS20: cortical plate |
Present |
Regionally restricted |
4D
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Expression in a line of neurons constituting the developing neocortical plate.
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Specimen
4F:
embryonic day 12.5
(more )
Specimen
4F:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: ganglionic eminence |
Present |
Diffuse |
4F
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Expression widened in parallel with the enlargement of the ganglionic eminence.
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| TS20: lateral ganglionic eminence |
Strong |
Regionally restricted |
4F
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Highest expression in the mantle region of the lateral ganglionic eminence, medial to the position of the lateral olfactory tract.
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| TS20: neocortex |
Present |
Regionally restricted |
4F
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Expression on the surface layer of the neocortex.
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| TS20: cortical plate |
Present |
Regionally restricted |
4F
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Expression in a line of neurons constituting the developing neocortical plate.
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| TS20: caudal ganglionic eminence |
Present |
Regionally restricted |
4F
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Diffuse expression over the wide mantle region of the caudal ganglionic eminence.
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Specimen
4G:
embryonic day 12.5
(more )
Specimen
4G:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: telencephalon |
Present |
Regionally restricted |
4G
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Expression surrounding the presumptive lateral olfactory tract position.
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