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Gene Expression Data
Assay Details
Assay
Reference: J:16725 Fujii T, et al., Expression patterns of the murine LIM class homeobox gene lim1 in the developing brain and excretory system. Dev Dyn. 1994 Jan;199(1):73-83
Assay type: RNA in situ
MGI Accession ID: MGI:3790070
Gene symbol: Lhx1
Gene name: LIM homeobox protein 1
Probe: clone 31
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen E7.5 not shown: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo Present

Specimen 3A: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: intermediate mesenchyme Present Regionally restricted 3A Expression in a region adjacent to 10 of the 11 somites present.

Specimen 3B: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: genitourinary system Present Regionally restricted 3B Strongest staining between the level of the somites 8-11 in the area of the presumptive mesonephric region.
TS13: nephrogenic cord Present 3B Expression in the nephrogenic cord.

Specimen 3C: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: nephric duct Present 3C Expression in the mesonephric duct.

Specimen 3D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: nephric duct Present 3D Expression in the mesonephric duct.

Specimen 3E: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: mesonephros Present 3E Globular expression ventral to the mesonephric duct, corresponding to the developing mesonephros.

Specimen E9.5 not shown: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: central nervous system Absent

Specimen 3F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: nephric duct, mesonephric portion Weak 3F Expression in mesonephric duct is less intense than at E9.5.
TS17: mesonephros Present 3F Localized expression ventral to the duct in the developing mesonephros.

Specimen 3G: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: midbrain Present Regionally restricted 3G Expression in distinct dorsal and lateral regions.
TS17: hindbrain Present Regionally restricted 3G In the dorsolateral region, a single stripe of expression anterior to the otic vesicle, with two stripes posterior to the otic vesicle.

Specimen 3H: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: midbrain Present Regionally restricted 3H Expression in distinct dorsal and lateral regions.
TS17: hindbrain Present Regionally restricted 3H Continuous weak expression spanning the dorsolateral regions of expression, connecting the stripes identified in Fig. 3G. In the ventromedial region, fine bands of perpendicular expression are connected by a longitudinal stripe of faint expression.

Specimen 3I: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: hindbrain Present Regionally restricted 3I

Specimen 3J (left): embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: future spinal cord Present Regionally restricted 3J (left) Four strips of expressing cells, arranged in 2 tightly apposed pairs dorsally and laterally.

Specimen 3J (right): embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: future spinal cord Present Regionally restricted 3J (right) Four strips of expressing cells, arranged in 2 tightly apposed pairs dorsally and laterally.

Specimen E10.5 not shown: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: telencephalon Weak

Specimen 3K: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: telencephalon Present 3K Expression in the telencephalon becomes more prominent

Specimen 3L: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Strong 3L

Specimen 5A: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: ureteric bud Present 5A
TS19: metanephros Present Regionally restricted 5A No expression in the proximal portion of the ureter or in the mesenchymal tissue around the bud.

Specimen 5B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS21: ureter Present Regionally restricted 5B Localized expression in areas coinciding with the position of the buds of the branching ureter.

Specimen 5C: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: ureter Present Regionally restricted 5C Expression in distal regions of the branching ureter.
TS21: primitive collecting duct Absent 5C

Specimen 5D: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: ureter Present Regionally restricted 5D Expression in distal regions of the branching ureter.
TS23: collecting duct Absent 5D

Specimen E15.5 female not shown: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: ovary Absent
TS23: female reproductive system Absent No expression in the oviduct.

Specimen E15.5 male not shown: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: testis Absent
TS23: male reproductive system Absent No expression in the epididymis.

Specimen 5E: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: ureter Present Regionally restricted 5E Expression in distal regions of the branching ureter.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory