Gene Expression Data
Assay Details
Assay
|
Reference:
|
J:85573
Williams SE, et al., Ephrin-B2 and EphB1 mediate retinal axon divergence at the optic chiasm. Neuron. 2003 Sep 11;39(6):919-35
|
Assay type:
|
RNA in situ
|
MGI Accession ID:
|
MGI:3578412
|
Gene symbol:
|
Ephb1
|
Gene name:
|
Eph receptor B1
|
Probe:
|
EphB1 cDNA3
|
Probe preparation:
|
Antisense labelled with digoxigenin RNA
|
Visualized with:
|
Alkaline phosphatase
|
Assay notes:
|
The probe used in this assay recognizes the extracellular domain. Alternatively, it is possible a probe to the 3' end of the transcript was used in this assay (MGI:3578308).
|
|
Results
|
Specimen
5A:
embryonic day 12.0
(more )
Note: This is a horizontal section.
Specimen
5A:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 12.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
This is a horizontal section.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: retina |
Absent |
|
5A
|
There is little detectable expression in the retina.
|
Specimen
5B:
embryonic day 13.0
(more )
Note: This is a horizontal section.
Specimen
5B:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 13.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
This is a horizontal section.
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: retina |
Present |
Regionally restricted |
5B
|
Expression is present centrally, in both temporal and nasal retina.
|
Specimen
5C:
embryonic day 14.0
(more )
Note: This is a horizontal section.
Specimen
5C:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 14.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
This is a horizontal section.
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: retina |
Present |
Regionally restricted |
5C
|
Expression is present in the dorsocentral retina.
|
Specimen
5D:
embryonic day 15.5
(more )
Note: This is a horizontal section.
Specimen
5D:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
This is a horizontal section.
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: retina |
Strong |
Regionally restricted |
5D
|
There is strong expression in the ventrotemporal retina, but there is no expression in the dorsocentral retina.
|
Specimen
5E:
embryonic day 17.0
(more )
Note: This is a horizontal section.
Specimen
5E:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 17.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
This is a horizontal section.
|
Structure |
Level |
Pattern |
Image |
Note |
TS25: retina |
Present |
|
5E
|
Expression in the ventrotemporal retina is signficantly reduced from that seen earlier, but it is upregulated elsewhere in the retina.
|
TS25: retina inner nuclear layer |
Strong |
Regionally restricted |
5E
|
The strongest expression is confined to a small number of retinal ganglion cells bordering the lens. Expression is also found in dorsal and nasal ganglion cells at this age.
|
TS25: retina outer nuclear layer |
Present |
|
5E
|
|
Specimen
5F:
embryonic day 12.0
(more )
Note: This is a frontal section.
Specimen
5F:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 12.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
This is a frontal section.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: retina |
Absent |
|
5F
|
There is little detectable expression in the retina.
|
Specimen
5G:
embryonic day 13.0
(more )
Note: This is a frontal section.
Specimen
5G:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 13.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
This is a frontal section.
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: neural retinal epithelium |
Present |
Regionally restricted |
5G
|
Expression is present in the dorsocentral retina in the retinal ganglion cells layer. It is absent in the ventrotemporal retina.
|
Specimen
5H:
embryonic day 14.0
(more )
Note: This is a frontal section.
Specimen
5H:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 14.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
This is a frontal section.
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: retina |
Present |
|
5H
|
Expression is present in the ventrotemporal and dorsocentral retina.
|
Specimen
5I:
embryonic day 15.5
(more )
Note: This is a frontal section.
Specimen
5I:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
This is a frontal section.
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: retina |
Strong |
Regionally restricted |
5I
|
There is strong expression in the ventrotemporal retina, but there is no expression in the dorsocentral retina.
|
Specimen
5J:
embryonic day 17.0
(more )
Note: This is a frontal section.
Specimen
5J:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 17.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
This is a frontal section.
|
Structure |
Level |
Pattern |
Image |
Note |
TS25: retina |
Present |
|
5J
|
Expression in the ventrotemporal retina is signficantly reduced from that seen earlier, but it is upregulated elsewhere in the retina.
|
TS25: retina inner nuclear layer |
Strong |
Regionally restricted |
5J
|
The strongest expression is confined to a small number of retinal ganglion cells bordering the lens. Expression is also found in dorsal and nasal ganglion cells at this age.
|
TS25: retina outer nuclear layer |
Present |
|
5J
|
|
Specimen
S1:
embryonic day 15.5
(more )
Note: This a horizontal section, taken from just above the level of the optic disc.
Specimen
S1:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
This a horizontal section, taken from just above the level of the optic disc.
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: retina nuclear layer |
Present |
Regionally restricted |
S1F
|
Expression is present in a small subset of retinal ganglion cells in the ventrotemporal retina.
|
|