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Gene Expression Data
Assay Details
Assay
Reference: J:85573 Williams SE, et al., Ephrin-B2 and EphB1 mediate retinal axon divergence at the optic chiasm. Neuron. 2003 Sep 11;39(6):919-35
Assay type: RNA in situ
MGI Accession ID: MGI:3578412
Gene symbol: Ephb1
Gene name: Eph receptor B1
Probe: EphB1 cDNA3
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: The probe used in this assay recognizes the extracellular domain. Alternatively, it is possible a probe to the 3' end of the transcript was used in this assay (MGI:3578308).
Results
Specimen 5A: embryonic day 12.0 (more )
Note: This is a horizontal section.
Structure Level Pattern Image Note
TS20: retina Absent 5A There is little detectable expression in the retina.

Specimen 5B: embryonic day 13.0 (more )
Note: This is a horizontal section.
Structure Level Pattern Image Note
TS21: retina Present Regionally restricted 5B Expression is present centrally, in both temporal and nasal retina.

Specimen 5C: embryonic day 14.0 (more )
Note: This is a horizontal section.
Structure Level Pattern Image Note
TS22: retina Present Regionally restricted 5C Expression is present in the dorsocentral retina.

Specimen 5D: embryonic day 15.5 (more )
Note: This is a horizontal section.
Structure Level Pattern Image Note
TS23: retina Strong Regionally restricted 5D There is strong expression in the ventrotemporal retina, but there is no expression in the dorsocentral retina.

Specimen 5E: embryonic day 17.0 (more )
Note: This is a horizontal section.
Structure Level Pattern Image Note
TS25: retina Present 5E Expression in the ventrotemporal retina is signficantly reduced from that seen earlier, but it is upregulated elsewhere in the retina.
TS25: retina inner nuclear layer Strong Regionally restricted 5E The strongest expression is confined to a small number of retinal ganglion cells bordering the lens. Expression is also found in dorsal and nasal ganglion cells at this age.
TS25: retina outer nuclear layer Present 5E

Specimen 5F: embryonic day 12.0 (more )
Note: This is a frontal section.
Structure Level Pattern Image Note
TS20: retina Absent 5F There is little detectable expression in the retina.

Specimen 5G: embryonic day 13.0 (more )
Note: This is a frontal section.
Structure Level Pattern Image Note
TS21: neural retinal epithelium Present Regionally restricted 5G Expression is present in the dorsocentral retina in the retinal ganglion cells layer. It is absent in the ventrotemporal retina.

Specimen 5H: embryonic day 14.0 (more )
Note: This is a frontal section.
Structure Level Pattern Image Note
TS22: retina Present 5H Expression is present in the ventrotemporal and dorsocentral retina.

Specimen 5I: embryonic day 15.5 (more )
Note: This is a frontal section.
Structure Level Pattern Image Note
TS23: retina Strong Regionally restricted 5I There is strong expression in the ventrotemporal retina, but there is no expression in the dorsocentral retina.

Specimen 5J: embryonic day 17.0 (more )
Note: This is a frontal section.
Structure Level Pattern Image Note
TS25: retina Present 5J Expression in the ventrotemporal retina is signficantly reduced from that seen earlier, but it is upregulated elsewhere in the retina.
TS25: retina inner nuclear layer Strong Regionally restricted 5J The strongest expression is confined to a small number of retinal ganglion cells bordering the lens. Expression is also found in dorsal and nasal ganglion cells at this age.
TS25: retina outer nuclear layer Present 5J

Specimen S1: embryonic day 15.5 (more )
Note: This a horizontal section, taken from just above the level of the optic disc.
Structure Level Pattern Image Note
TS23: retina nuclear layer Present Regionally restricted S1F Expression is present in a small subset of retinal ganglion cells in the ventrotemporal retina.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/21/2024
MGI 6.23
The Jackson Laboratory