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Gene Expression Data
Assay Details
Assay
Reference: J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
Assay type: RNA in situ
MGI Accession ID: MGI:3507537
Gene symbol: Lmo4
Gene name: LIM domain only 4
Probe: MTF#167
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: head Present MTF# E 167 Image Expression was detected in neural and non-neural tissue.
TS21: central nervous system Present Single cells MTF# E 167 Image Expression was detected in some cells.
TS21: cerebral cortex Present Single cells MTF# E 167 Image Expression was detected in some cells.
TS21: corpus striatum Present Single cells MTF# E 167 Image Expression was detected in some cells.
TS21: thalamus Present Single cells MTF# E 167 Image Expression was detected in some cells.
TS21: hypothalamus Present Single cells MTF# E 167 Image Expression was detected in some cells.
TS21: midbrain Absent MTF# E 167 Image
TS21: hindbrain Present Single cells MTF# E 167 Image Expression was detected in some cells.
TS21: spinal cord Present Single cells MTF# E 167 Image Expression was detected in some cells.
TS21: cranial ganglion Present Single cells MTF# E 167 Image Expression was detected in some cells.
TS21: dorsal root ganglion Present Single cells MTF# E 167 Image Expression was detected in some cells.
TS21: brain ventricular layer Absent MTF# E 167 Image
TS21: retina Present Single cells MTF# E 167 Image Expression was detected in some cells.
TS21: ear Present Single cells MTF# E 167 Image The tissue was inner ear and ear structures. Expression was detected in some cells.
TS21: olfactory lobe Present Single cells MTF# E 167 Image The tissue was olfactory epithelium and/or bulb. Expression was detected in some cells.
Specimen 2: postnatal newborn (more )
Structure Level Pattern Image Note
TS27: head Present MTF# P 167 Image Expression was detected in neural and non-neural tissue.
TS27: central nervous system Present Single cells MTF# P 167 Image Expression was detected in some cells.
TS27: cerebral cortex Present Single cells MTF# P 167 Image Expression was detected in some cells.
TS27: corpus striatum Present Single cells MTF# P 167 Image Expression was detected in some cells.
TS27: thalamus Present Single cells MTF# P 167 Image Expression was detected in some cells.
TS27: hypothalamus Present Single cells MTF# P 167 Image Expression was detected in some cells.
TS27: midbrain Present Single cells MTF# P 167 Image Expression was detected in some cells.
TS27: cerebellum Present Single cells MTF# P 167 Image Expression was detected in some cells.
TS27: hindbrain Present Single cells MTF# P 167 Image Expression was detected in some cells.
TS27: spinal cord Present Single cells MTF# P 167 Image Expression was detected in some cells.
TS27: cranial ganglion Absent MTF# P 167 Image
TS27: dorsal root ganglion Absent MTF# P 167 Image
TS27: brain ventricular layer Absent MTF# P 167 Image
TS27: retina Present Single cells MTF# P 167 Image Expression was detected in some cells.
TS27: ear Present Single cells MTF# P 167 Image The tissue was inner ear and ear structures. Expression was detected in some cells.
TS27: main olfactory bulb Present Single cells MTF# P 167 Image The tissue was olfactory epithelium and/or bulb. Expression was detected in some cells.
Specimen 1A: postnatal newborn (more )
Note: Authors did not specify which probe was used when staining this specimen; it is possible MTF#168 (MGI:3506041) was used.
Structure Level Pattern Image Note
TS27: cerebral cortex Present 1A Lmo4
Specimen 1B: postnatal newborn (more )
Note: Authors did not specify which probe was used when staining this specimen; it is possible MTF#168 (MGI:3506041) was used.
Structure Level Pattern Image Note
TS27: cerebral cortex Present Regionally restricted 1B Lmo4 There is laminar-specific expression present in the cortex.
Specimen S1: postnatal newborn (more )
Note: Authors did not specify which probe was used when staining this specimen; it is possible MTF#168 (MGI:3506041) was used.
Structure Level Pattern Image Note
TS27: corpus striatum Present Graded S1C Lmo4 Expression levels are high in the ventro-medial region and low in the dorso-lateral region.
Specimen S4: postnatal newborn (more )
Note: Authors did not specify which probe was used when staining this specimen; it is possible MTF#168 (MGI:3506041) was used.
Structure Level Pattern Image Note
TS27: retina Present S4_Lmo4
Specimen S5: postnatal newborn (more )
Note: Authors did not specify which probe was used when staining this specimen; it is possible MTF#168 (MGI:3506041) was used.
Structure Level Pattern Image Note
TS27: retina Present S5_Lmo4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/14/2024
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