Gene Expression Data
Assay Details
Assay
|
Reference:
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J:2360
Moase CE, et al., N-CAM alterations in splotch neural tube defect mouse embryos. Development. 1991 Nov;113(3):1049-58
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Assay type:
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Immunohistochemistry
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MGI Accession ID:
|
MGI:1934932
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Gene symbol:
|
Ncam1
|
Gene name:
|
neural cell adhesion molecule 1
|
|
Results
|
Specimen
1A:
embryonic day 9.0
(more )
Note: 16 somites.
Specimen
1A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
16 somites.
|
Specimen
1B:
embryonic day 9.0
(more )
Note: 16 somites.
Specimen
1B:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
16 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: neural tube |
Present |
Regionally restricted |
1B
|
In a region were the neural folds begin to fuse staining is most intense in the lateral portions of the neural tube.
|
TS14: trunk mesenchyme |
Present |
Regionally restricted |
1B
|
Less staining in the mesoderm surrounding the neural tube.
|
Specimen
1C:
embryonic day 9.0
(more )
Note: 16 somites.
Specimen
1C:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
16 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: neural tube |
Present |
Regionally restricted |
1C
|
Staining is most intense in the lateral portions of the neural tube in a region where the neural folds appose one another just prior to fusion.
|
TS14: trunk mesenchyme |
Present |
Regionally restricted |
1C
|
Staining is in the mesoderm surrounding the neural tube.
|
Specimen
1D:
embryonic day 9.0
(more )
Note: 16 somites.
Specimen
1D:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
16 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: future spinal cord neural plate |
Present |
Regionally restricted |
1D
|
Staining in the open caudal region; even distribution throughout the neuroepithelial tissue.
|
TS14: neural tube |
Present |
Regionally restricted |
1D
|
Staining in the open caudal region; even distribution throughout the neuroepithelial tissue.
|
Specimen
2B:
embryonic day 8.5; Pax3Sp/ Pax3Sp
(more )
Note: 9 somites.
Specimen
2B:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax3Sp/Pax3Sp
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
9 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: future hindbrain |
Present |
Regionally restricted |
2B
|
Section through the hindbrain region showing the foregut. Staining in the lateral portions of the closing neural tube in the forebrain and hindbrain region.
|
TS13: future prosencephalon |
Present |
Regionally restricted |
2B
|
Section through the hindbrain region showing the foregut. Staining in the lateral portions of the closing neural tube in the forebrain and hindbrain region.
|
Specimen
2C:
embryonic day 8.5; Pax3Sp/ Pax3Sp
(more )
Note: 9 somites.
Specimen
2C:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax3Sp/Pax3Sp
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
9 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: neural tube |
Present |
|
2C
|
Open caudal region of the embryo. Staining in the neuroepithelium.
|
Specimen
2D:
embryonic day 8.5
(more )
Note: 11 somites.
Specimen
2D:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
11 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: future hindbrain |
Present |
Regionally restricted |
2D
|
Staining in the lateral portions of the closing neural tube in the forebrain and hindbrain regions.
|
TS13: future prosencephalon |
Present |
Regionally restricted |
2D
|
Staining in the lateral portions of the closing neural tube in the forebrain and hindbrain regions.
|
Specimen
2E:
embryonic day 8.5
(more )
Note: 11 somites.
Specimen
2E:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
11 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: future hindbrain |
Present |
Regionally restricted |
2E
|
Staining in the lateral portions of the closing neural tube in the forebrain and hindbrain regions.
|
TS13: future prosencephalon |
Present |
Regionally restricted |
2E
|
Staining in the lateral portions of the closing neural tube in the forebrain and hindbrain regions.
|
Specimen
2F:
embryonic day 8.5
(more )
Note: 11 somites.
Specimen
2F:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
11 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: neural tube |
Present |
Regionally restricted |
2F
|
Open caudal region of the embryo. Expression in the lateral portions of the neural tube.
|
Specimen
3A:
embryonic day 9.0; Pax3Sp/ Pax3Sp
(more )
Note: 16 somites.
Specimen
3A:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax3Sp/Pax3Sp
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
16 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: neural tube |
Strong |
|
3A
|
Strong staining along the lateral portions of the neural tube. Sections through the trunk, open neural tube, and caudal regions.
|
Specimen
3B:
embryonic day 9.0; Pax3Sp/ Pax3Sp
(more )
Note: 16 somites.
Specimen
3B:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax3Sp/Pax3Sp
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
16 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: neural tube |
Strong |
|
3B
|
Strong staining along the lateral portions of the neural tube. Sections through the trunk, open neural tube, and caudal regions.
|
Specimen
3C:
embryonic day 9.0; Pax3Sp/ Pax3Sp
(more )
Note: 16 somites.
Specimen
3C:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax3Sp/Pax3Sp
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
16 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: neural tube |
Strong |
|
3C
|
Strong staining along the lateral portions of the neural tube. Sections through the trunk, open neural tube, and caudal regions.
|
Specimen
not shown:
embryonic day 9.5; Pax3Sp/ Pax3Sp
(more )
Note: 16 - 24 somites.
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax3Sp/Pax3Sp
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
16 - 24 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: neural tube |
Strong |
|
|
Strong staining along the lateral portions of the neural tube.
|
Specimen
3D:
embryonic day 9.0
(more )
Note: 16 somites.
Specimen
3D:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
16 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: neural tube |
Present |
|
3D
|
Staining is reduced compared to Sp-/- embryos. Sections through the trunk, open neural tube, and caudal regions.
|
Specimen
3E:
embryonic day 9.0
(more )
Note: 16 somites.
Specimen
3E:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
16 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: neural tube |
Present |
|
3E
|
Staining is reduced compared to Sp-/- embryos. Sections through the trunk, open neural tube, and caudal regions.
|
Specimen
3F:
embryonic day 9.0
(more )
Note: 16 somites.
Specimen
3F:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
16 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: neural tube |
Present |
|
3F
|
Staining is reduced compared to Sp-/- embryos. Sections through the trunk, open neural tube, and caudal regions.
|
Specimen
not shown:
embryonic day 9.5
(more )
Note: 16 - 24 somites.
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
16 - 24 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: neural tube |
Present |
|
|
Staining is reduced compared to Sp-/- embryos.
|
Specimen
not shown:
embryonic day 9.0; Pax3Sp/Pax3 +
(more )
Note: 16 somites.
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax3Sp/Pax3+
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
16 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: neural tube |
Present |
|
|
Staining is similar to wild-type but the heterozygotes showed more variability.
|
Specimen
not shown:
embryonic day 9.0; Pax3Sp-d/Pax3 +
(more )
Note: 17-25 somites.
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax3Sp-d/Pax3+
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
17-25 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: neural tube |
Present |
|
|
Less dramatic differences between mutant and non-mutant embryos in staining patterns.
|
Specimen
not shown:
embryonic day 9.0; Pax3Sp-d/Pax3 +
(more )
Note: 17-25 somites.
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax3Sp-d/Pax3+
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
17-25 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: neural tube |
Present |
|
|
Less dramatic differences between mutant and non-mutant embryos in staining patterns.
|
Specimen
not shown:
embryonic day 9.0; Pax3Sp-d/ Pax3Sp-d
(more )
Note: 17-25 somites.
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax3Sp-d/Pax3Sp-d
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
17-25 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: neural tube |
Present |
|
|
Less dramatic differences between mutant and non-mutant embryos in staining patterns.
|
Specimen
not shown:
embryonic day 9.0; Pax3Sp-d/ Pax3Sp-d
(more )
Note: 17-25 somites.
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax3Sp-d/Pax3Sp-d
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Ste. Marie's
|
Embedding:
|
Paraffin
|
Note:
|
17-25 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: neural tube |
Present |
|
|
Less dramatic differences between mutant and non-mutant embryos in staining patterns.
|
|