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Gene Expression Data
Assay Details
Assay
Reference: J:28316 Bouillet P, et al., Efficient cloning of cDNAs of retinoic acid-responsive genes in P19 embryonal carcinoma cells and characterization of a novel mouse gene, Stra1 (mouse LERK-2/Eplg2). Dev Biol. 1995 Aug;170(2):420-33
Assay type: RNA in situ
MGI Accession ID: MGI:1338468
Gene symbol: Efnb1
Gene name: ephrin B1
Probe: Stra1
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 5. A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: diencephalon Strong Regionally restricted 5A Expression is high in part of the Diencephalic vesicle.
TS17: forelimb bud Strong 5A
TS17: hindlimb bud Strong 5A
TS17: mesonephros Strong 5A
TS17: hindbrain Weak 5A
TS17: midbrain Weak 5A
TS17: future spinal cord Weak Regionally restricted 5A Expression is detected in the dorsal spinal cord.
TS17: tail future spinal cord Weak Regionally restricted 5A Expression is detected in the dorsal spinal cord.

Specimen 5. B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: embryo mesenchyme Present Regionally restricted 5B Expression was detected in the Telenecephalic Vesicles, dorsal spinal cord and the laterovertebral mesenchyme. The latervertebral mesenchyme is defined as the cells located between the prevertebrae and the dorsal root ganglia.
TS20: spinal cord Present Regionally restricted 5B Expression was detected in the Telenecephalic Vesicles, dorsal spinal cord and the laterovertebral mesenchyme. The latervertebral mesenchyme is defined as the cells located between the prevertebrae and the dorsal root ganglia.
TS20: tail spinal cord Present Regionally restricted 5B Expression was detected in the Telenecephalic Vesicles, dorsal spinal cord and the laterovertebral mesenchyme. The latervertebral mesenchyme is defined as the cells located between the prevertebrae and the dorsal root ganglia.
TS20: telencephalon Present Regionally restricted 5B Expression was detected in the Telenecephalic Vesicles, dorsal spinal cord and the laterovertebral mesenchyme. The latervertebral mesenchyme is defined as the cells located between the prevertebrae and the dorsal root ganglia.
TS20: nasal cavity Strong Regionally restricted 5B Expression is high in the mesenchyme around the nasal cavities.
TS20: inner ear Strong 5B
TS20: genital tubercle Present 5B
TS20: left lung mesenchyme Present 5B
TS20: mandible primordium Present 5B
TS20: mesonephros Present 5B
TS20: right lung mesenchyme Present 5B
TS20: tongue Present 5B
TS20: gut Present Regionally restricted 5B Expression was detected in the mesenchyme of the gut.

Specimen 5. C: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: telencephalon Present Regionally restricted 5C Expression was detected in the telencephalic vesicles.
TS21: diencephalon Present 5C

Specimen 5. D: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: telencephalon Present Regionally restricted 5D Expression was detected in the telencephalic vesicles.
TS21: diencephalon Present 5D
TS21: inner ear Present 5D
TS21: pinna mesenchyme Present 5D
TS21: trigeminal ganglion Present 5D

Specimen 5. E: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: diencephalon lateral wall marginal layer Present Regionally restricted 5E Expression was detected in the dorsal half of the ependymal layer.
TS21: midbrain ventricular layer Present Regionally restricted 5E Expression was detected in the dorsal half of the ependymal layer.
TS21: dorsal root ganglion Present 5E
TS21: spinal cord floor plate Present 5E

Specimen 5. F: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: dorsal root ganglion Present 5F
TS22: spinal cord floor plate Present 5F

Specimen 6. A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: limb Strong Regionally restricted 6A Expression is high in the cells surrounding the cartilaginous skeletal primodia of the developing limbs and in the peripheral cell layers of the limbs.

Specimen 6. B: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: nasal cavity Present Regionally restricted 6B Expression was detected in the mesenchyme around the nasal cavities.

Specimen 6. C: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: lung mesenchyme Present 6C

Specimen E9.5: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: telencephalic vesicle Strong Regionally restricted
TS15: forelimb bud mesenchyme Weak Uniform Diffuse expression in somitic, facial and forelimb bud mesenchyme.
TS15: head mesenchyme Weak Uniform Diffuse expression in somitic, facial and forelimb bud mesenchyme.
TS15: somite Weak Uniform Diffuse expression in somitic, facial and forelimb bud mesenchyme.

Specimen E10.5: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: telencephalon Strong Expression was high in the Telencephalic Vesicles.

Specimen E14.5: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: embryo mesenchyme Weak
TS22: palatal shelf Strong
TS22: lower jaw tooth Strong Regionally restricted Expression detected in the epithelium around the nasal cavities and around the tooth buds.
TS22: nasal cavity epithelium Strong Regionally restricted Expression detected in the epithelium around the nasal cavities and around the tooth buds.
TS22: upper jaw tooth Strong Regionally restricted Expression detected in the epithelium around the nasal cavities and around the tooth buds.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory