rs8279821 SNP Detail

Summary

• ID
  rs8279821
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:79492446 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGAGATGC CTGCTGTAAC
  CAACACAGTG TGTGGTTACG ACTGCAGGTG GCCTGGATGG AGAGGGGGGA GTGGGGGTGG
  GAAATCAGCT AGAGCGGGGG CTGAAGGGCA GGCTGCAGAC TTGGCACCTA GAGGCAGGGG
  GGAAGGCAGT GACGGTAATC TACCTGCAAG GAGAAATGGA GAGAACAGAC TCATGAGGAC
  R
  GAGGTTAGAC TCAGGGAAAG ATTCCCCAGG CTCGAGAGGT AAGGCAGGCA GAGCAGAATG
  AAGCCAGTTC CCAGCAGGCC ATCAAAAGCA TACCAGCTCC ACCTCTGGGT TCCTCAACAG
  ATGCCAGGGG CCCCTTGGGA CAGTCTTCAG ATTCGCCCCC TTTTCCTCCT GACCAACTTC
  TTTCCCCTCA GCTCTCCAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
ss12777296	Anpep_AN5132_1	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	G	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
rs8279821					SNP	A	A	A	A	A	A	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79492446 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Anpep	alanyl aminopeptidase, membrane			Intron
				Noncoding-Transcript-Variant
Gm71751	predicted gene, 71751			within coordinates
Rr649722	regulatory region 649722			265 bp distal
Rr649723	regulatory region 649723			within coordinates
Rr649724	regulatory region 649724			1354 bp proximal
Tssr67371	transcription start site region 67371			859 bp downstream
Tssr67372	transcription start site region 67372			608 bp downstream
Tssr67373	transcription start site region 67373			189 bp downstream
Tssr67374	transcription start site region 67374			149 bp downstream
Tssr67375	transcription start site region 67375			113 bp downstream
Tssr73161	transcription start site region 73161			1781 bp upstream
Tssr73162	transcription start site region 73162			1723 bp upstream
Tssr73163	transcription start site region 73163			1702 bp upstream
Tssr73164	transcription start site region 73164			1539 bp upstream
Tssr73165	transcription start site region 73165			993 bp upstream
Tssr73166	transcription start site region 73166			961 bp upstream
Tssr73167	transcription start site region 73167			759 bp upstream
Tssr73168	transcription start site region 73168			738 bp upstream
Tssr73169	transcription start site region 73169			701 bp upstream
Tssr73170	transcription start site region 73170			682 bp upstream
Tssr73171	transcription start site region 73171			597 bp upstream
Tssr73172	transcription start site region 73172			585 bp upstream
Tssr73173	transcription start site region 73173			567 bp upstream
Tssr73174	transcription start site region 73174			481 bp upstream
Tssr73175	transcription start site region 73175			453 bp upstream
Tssr73176	transcription start site region 73176			396 bp upstream
Tssr73177	transcription start site region 73177			370 bp upstream
Tssr73178	transcription start site region 73178			344 bp upstream
Tssr73179	transcription start site region 73179			279 bp upstream
Tssr73180	transcription start site region 73180			189 bp upstream
Tssr73181	transcription start site region 73181			123 bp upstream
Tssr73182	transcription start site region 73182			111 bp upstream
Tssr73183	transcription start site region 73183			72 bp upstream
Tssr73184	transcription start site region 73184			577 bp downstream
Tssr73185	transcription start site region 73185			1826 bp downstream