rs8279337 SNP Detail

Summary

• ID
  rs8279337
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118995947 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AGTTC AATCCCCAGC AACCACATGG
  Y
  AGCTCACAAC CATCTGTAAT AGAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	SM/J	SPRET/EiJ
ss12776783	Gfrp_JC8517_2	ROCHEBIO	RPAMM	f	SNP	T			C		C
ss147324272	ENSMUSSNP2402289	ENSEMBL	ENSEMBL_Sanger	r	SNP		A
ss320473923	CHEV_2_118991202	CHEVERUD	SCREENING_POP	r	SNP			G		A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	SM/J	SPRET/EiJ
rs8279337					SNP	T	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118995947 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi12107	CpG island 12107	1856 bp proximal
Rr563425	regulatory region 563425	127 bp proximal
Rr563426	regulatory region 563426	1817 bp proximal