rs8272922 SNP Detail

Summary

• ID
  rs8272922
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:104202019 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGTGATAA TGAGCCTCTG
  TCAGGACCTG CCATGCTCCA GTCTCTCTAC AGAACTGAAG TTCCTATCAG CTAAGTCATT
  CTCTGCAGGC AAAGCCTCCT TTCAGATTTC CTCCACTGCC AGTCACAGGC AGCTTCCCTT
  CAGATGTCAG ATAGCCAAAC AATACAAAGC ATATCTCTGT TTTTTTATGT ACCGATTGTA
  R
  CATTTCAGGA CACTTATACA GAAGCAAGCT AAAGCCTGTC AACATTGAGG AATGTGTTTA
  TTAATGTGCA ATCTTCCCTA TAGAAATGTG CCAGCATGGA CATAGAATTG TTTTCCTTTT
  GAAGTGACTT AGAAAGCCCA GCACAAGTGT CACCTTTACC CCTCCTGGGG ACTTGTGGTC
  TGTGCTTGTG CCCGGTCTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12770179	Serpina3g_JC7990_5	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8272922					SNP	G	G	G	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:104202019 () rs orientation: forward

Symbol	Name	Function Class
Rr471887	regulatory region 471887	2 bp proximal
Serpina3g	serine (or cysteine) peptidase inhibitor, clade A, member 3G	485 bp upstream
Tssr114835	transcription start site region 114835	366 bp upstream
Tssr114836	transcription start site region 114836	479 bp upstream