rs8266403 SNP Detail

Summary

• ID
  rs8266403
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:46401064 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TTCCC TCATTGTGCA ATGGGAGCAC
  M
  GGAGACAATT TTCTGTGCGG TGGCA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12763297	Saa2_JC7060_21	ROCHEBIO	RPAMM	f	SNP		A	A	A	A	A	A	A	A	C	A	A	A	C	A
ss149179916	ENSMUSSNP5557740	ENSEMBL	ENSEMBL_Sanger	r	SNP	G		T								T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8266403					SNP	C	A	A	A	A	A	A	A	A	C	A	A	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:46401064 () rs orientation: reverse

Symbol	Name	Function Class
Gm74180	predicted gene, 74180	within coordinates
Saa2	serum amyloid A 2	193 bp upstream
Tssr66700	transcription start site region 66700	192 bp upstream
Tssr66701	transcription start site region 66701	713 bp upstream
Tssr66702	transcription start site region 66702	1776 bp upstream
Tssr66703	transcription start site region 66703	1799 bp upstream
Tssr66704	transcription start site region 66704	1854 bp upstream