rs8261482 SNP Detail

Summary

• ID
  rs8261482
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:167199607 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCTGTGTCT ATTGCTTAAG AAAGAAGCTT TAAACAGTTA
  ACGTTTATTT GTATAGGTGT TACATACGTG TGCGACATAC AGTGCACGCG TAGAGGTCAG
  R
  GGCTAACTTG TGGGAGCCAG ATCAACACAT GGCCATCAGG CTTTGTGACA AGCGTCGTTA
  CCTGCTCATG TGACTGAGCT CATTACTTAA CCTTTTAAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12758064	Mgst3_1_AN4509_4	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	A	A	G	G	G	G
ss146037818	ENSMUSSNP607733	ENSEMBL	ENSEMBL_Sanger	f	SNP			G								A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8261482					SNP	G	G	G	G	G	G	G	G	G	A	A	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:167199607 () rs orientation: forward

Symbol	Name	Function Class
Mgst3	microsomal glutathione S-transferase 3	mRNA-UTR
Rr396523	regulatory region 396523	1835 bp downstream
Rr422698	regulatory region 422698	1953 bp distal
Rr422699	regulatory region 422699	1896 bp distal
Rr422700	regulatory region 422700	1346 bp distal
Rr422701	regulatory region 422701	1602 bp distal
Rr422702	regulatory region 422702	1979 bp proximal
Tssr14852	transcription start site region 14852	379 bp downstream
Tssr14853	transcription start site region 14853	1483 bp downstream