rs8253192 SNP Detail

Summary

• ID
  rs8253192
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:153649873 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GGCCC TGCGGACCTG CTTCATTCTG
  R
  GTCAATGGGC TCAGCCACTT CTCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12748935	U21488_AN701_2	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8253192					SNP	G	G	G	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153649873 () rs orientation: reverse

Symbol	Name	Function Class
Acadm	acyl-Coenzyme A dehydrogenase, medium chain	Intron
Cpgi13964	CpG island 13964	within coordinates
Rr587801	regulatory region 587801	within coordinates
Rr587802	regulatory region 587802	386 bp proximal
Tssr32439	transcription start site region 32439	615 bp upstream
Tssr36252	transcription start site region 36252	189 bp downstream
Tssr36253	transcription start site region 36253	225 bp downstream
Tssr36254	transcription start site region 36254	396 bp downstream