rs8244751 SNP Detail

Summary

• ID
  rs8244751
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:76868462 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              AACCCCTGGG CCCCGCAGCC
  CGCCTGAGCC CCTTTACGAG CCCCCTACCC GTCCAGCGCT TGACCGGGTC TCAGCTCACA
  GCAGATTGCT TGATCTGATC GAGCACAGAG GTGACCGCCC GGCCTAAGAC CAAGCAAGGC
  CCCTCCCCGG GTCCGCCCCT GACCCCTGCT GGCCTGCAGA AGTCTGCGCT GGCTCTGTCC
  S
  GCTCCTCTTG AGACGAGCGC CCCGCGACCA CCTGCTAAAG CATTCCAGGC ACCAAGGCAT
  TGACCGCTAG ATATAGACTG CACCAGCTGT GCACGCCCTT CGTTTGGGTA TCAGCGTCTT
  TAGGTTCCAA GGGCACCGAC GGATTGCGCT GAGCTATGCA TGGAGACCCC CTACACACAC
  ACACACACAC ACACACACAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ
ss12739752	AF007863_MC852_2	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ
rs8244751					SNP	G	G	G	G	G	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:76868462 () rs orientation: reverse

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi1753	CpG island 1753			within coordinates
Rr434376	regulatory region 434376			within coordinates
Rr434377	regulatory region 434377			25 bp proximal
Rr434378	regulatory region 434378			94 bp proximal
Rr434379	regulatory region 434379			368 bp proximal
Rr434380	regulatory region 434380			515 bp proximal
Rr434381	regulatory region 434381			651 bp proximal
Slc19a1	solute carrier family 19 (folate transporter), member 1			Intron
				mRNA-UTR
				Noncoding-Transcript-Variant
Tssr94203	transcription start site region 94203			373 bp downstream
Tssr94204	transcription start site region 94204			351 bp downstream
Tssr94205	transcription start site region 94205			83 bp upstream
Tssr94206	transcription start site region 94206			612 bp upstream
Tssr94207	transcription start site region 94207			632 bp upstream
Tssr94208	transcription start site region 94208			662 bp upstream
Tssr94209	transcription start site region 94209			676 bp upstream