rs8244645 SNP Detail

Summary

• ID
  rs8244645
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:51356279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                           NATAAGA CTTAAAATAT ATAGTCACTT TTACTTTGTT
  TNCACATTAN TCTGCACTAC AATCCCAGAT ATCACATGAG TCATACTNTC TCTTTTTCTG
  M
  TGAGGAATGG AACAGAAACT GAGTCTGAGA GTAAAACTTC TCTGTGAAGA ATTAGGATGT
  CAGAGTTGCA GCGTGGNGTA Gcacacataa cacacacaca cacacacaca cacagagaga
  tagagagaga ganananaga gagagagaga gagagagaga gagagagaga gagagagaga
  gagagagaga gagagagaga aatagtgaga aagncagaga ATGTNATAGG GGACAGTGAA
  AAGTAAAATA AATGTTTAAA TCATAAAGAT CTTTANCCCC AGAATATGTG TCNTAAAGAA
  TGTGTCTTTT NTTTAAAGGA NCTTAANAGA ATGAGTGTTT ACNCAATCAT CTGCTCTTAG
  GAAATTACAG AAGTTTCCCT TCTCATAATA GCTATGATGT AGAAAACCCA TGACAGGAAG
  GACCTGCCCT CAAGATGACA ACTGCATATC TGATGTTACA GGACAGACAT TTGTCAGACN
  GGCCCAAGAG AACAGCTACG AA                                         
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	B10.D2-Hc<0> H2 H2-T18/oSnJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ
ss12739645	U05265_MC806_1	ROCHEBIO	RPAMM	f	SNP	A	A	A	C	A	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	B10.D2-Hc<0> H2 H2-T18/oSnJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ
rs8244645					SNP	A	A	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:51356279 () rs orientation: forward

Symbol	Name	Function Class
Gm49339	predicted gene, 49339	429 bp upstream
Lilrb4b	leukocyte immunoglobulin-like receptor, subfamily B, member 4B	478 bp upstream
Rr431273	regulatory region 431273	290 bp proximal
Tssr93232	transcription start site region 93232	53 bp upstream
Tssr93233	transcription start site region 93233	630 bp upstream
Tssr93234	transcription start site region 93234	656 bp upstream
Tssr93235	transcription start site region 93235	949 bp upstream
Tssr93236	transcription start site region 93236	1435 bp upstream
Tssr93237	transcription start site region 93237	1474 bp upstream
Tssr93238	transcription start site region 93238	1498 bp upstream
Tssr93239	transcription start site region 93239	1523 bp upstream
Tssr93240	transcription start site region 93240	1540 bp upstream
Tssr93241	transcription start site region 93241	1562 bp upstream
Tssr93242	transcription start site region 93242	1602 bp upstream
Tssr97553	transcription start site region 97553	251 bp downstream