rs8236560 SNP Detail

Summary

• ID
  rs8236560
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25596684 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAATGGGG GCTCTGGAGA
  AATTATATCT GCAGACCTTA AAAAAACCTG GATCAGGGAA TGAACAGGCA GAGACAAACA
  AAAGATCATG GGACACTACT CTTGTCAAGC CAAATGTAAT CACGTTTACC CAGGACATAA
  AGAACATACA GAGAGGCCTC CATAATTTAA GATTAGACAT GTAAATACAC CCCAGACATG
  Y
  AAGAATAGAT TAGGTAGCAC ATCTAGACTC AGACACAGAA ATACACATCC GTACATTCAT
  CTCAGAAATG ACCTTTCAGG TATTAAAAGC GTACAGCACA CCCGCAGTCT CTTGTCCCAG
  TAAGTGAACA GACAAAACTG AGCTGACAAG GGCACACCCA CCTCCATAAA ACAAGAAGCA
  TCACTCCCAG TGCCCTTTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12752069	Cyp2b10_1_AN2676_6	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	T	T	T	T	C	T	T	T	T	C
ss12753397	Cyp2b10_1_JC3929_6	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	T	T	T	T	C	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8236560					SNP	T	T	T	T	T	T	T	T	T	C	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25596684 () rs orientation: forward

Symbol	Name	Function Class
Cyp2b10	cytochrome P450, family 2, subfamily b, polypeptide 10	399 bp upstream
Tssr65172	transcription start site region 65172	392 bp upstream