rs6408823 SNP Detail

Summary

• ID
  rs6408823
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:103901614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTGTGCGC TGTATCGCTA
  GCTAGGCTGT GTCTTTGTCC TGGTCACCTA ACCCCTGTTC CCATGTGCTT CATCTTAAAA
  TATGGAGCAA TGTGAAGGAT GGATTGGGGG CTTTCCCTGG CTCGGATTCT CTGGAGTTAA
  GATCCATCCT CTGCCTTTCA CCTGTTTTCT AGATGAACAG AAAAAGAGGA CCTGAAGTGC
  R
  TGAAGAATTA TCCTAGTAGG ATTTGACTAG GCAGTTAATT AACAAAACAA AGCAGTGACA
  TTCTACATCA TATTAGTTGT GAATTAGTGC TGCAGATTGC TACCTCATCT ATAAGACAGA
  TTCCATTACA ATCCTTCTGG GGCCCATAGA ATCAGTAACT TAACAGTTTT CAAATTTCTC
  GAACACTGAA AGTTAAGTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8815038	WI_WGS_4_101757753	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6408823					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:103901614 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dab1	disabled 1			Intron
				Noncoding-Transcript-Variant
Rr596428	regulatory region 596428			587 bp distal
Rr596429	regulatory region 596429			272 bp proximal