rs6385532 SNP Detail

Summary

• ID
  rs6385532
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83427596 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAGAACCT GGGAATTCTC
  CTGGGTGCCC TCTGGACTCA TATCCACACC TATTAGAAAT TCTGGTGATG GCCCTACTAT
  ATGCCACAAC ACTACAAGCC AGCATCCGAG GACAGAGATA AAAATCAGGG GACATTTTAT
  AAGAAGGCTA CAACCTAGGC AATTAACCCA TTCCTCTGTA AACCTTTACT GCATCCTTGG
  K
  GAAGATAACT CTACATCCTA ATCCCATAAA GGCCCCATGT CTTAATGATT CTTTCAATGA
  TAAGCAGATG CTAAGGCGAG TTGTAGAGGA GACATTCAAG CCATGAAGTT AAAGTAAGAA
  CTAAATGTTC TATAATTGAA GAGGATGAAA AGAACTTTGA CAGAATGACC TGGGCTTTCA
  TCTTTCAGTT TGGCCTCTGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8791688	WI_WGS_3_84218986	WI	MOUSE	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6385532					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83427596 () rs orientation: forward

Symbol	Name	Function Class
Rr578867	regulatory region 578867	1726 bp distal