rs6381995 SNP Detail

Summary

• ID
  rs6381995
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:174500910 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         tctgccaact
  cccatctgcc tgtctttgaa tacctctagt ggaggcttcc tctcttctct tcacttttca
  gcaccaggat tctcttttca tttctcttta agattttctg tttctttatt ggtgctgtca
  ttttgactgc acatcaattt ttttccatct ctttctttga gatgtttaaa aattctttTC
  ATACACAATA CCTAACGACT GACTGCGTTC TGTCTTTGAA TAGTCCATAG TTCCCTGTTT
  M
  TTGAACATTC GTTTGATTAT TATTTTTATT TAGAATTGGA TAATGCAGCA ATGCAGATCA
  CTCCTGGAGT CCACTGGTTT GTTTGAAGAT AAAAATAAGA CATGGCAgcc aaggagttgg
  ctgagtggat agacatatct attgtgtaaa tntgaggacc agagttctct aaaacctgtg
  taaatgcang gtgtgcacag caaccacgtg taatttcagt gcccagaggc agagaaatag
  attgctagag                                                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8788151	WI_WGS_1_175985978	WI	MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6381995					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:174500910 () rs orientation: forward

Symbol	Name	Function Class
Fmn2	formin 2	Intron
Rr423785	regulatory region 423785	1407 bp proximal
Rr423786	regulatory region 423786	1480 bp proximal