rs6367669 SNP Detail

Summary

• ID
  rs6367669
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:84199281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGCACATG GAGAGAGATT
  TACAAACACT TGCTTGAAAA CCAATAAATA TTTTAAAATA TGTAGATGAA AAATATCTAC
  ACAAATTTGC TAAATGTTAT TAAAAACTTA TAAGCCACAT ATTCTCTTAT TTAAGGAATT
  AGAAGTCACA TTGAATCTTT AAGATAATGC ATTTATTGAT CTAGTTTATA CTGTATAGCA
  Y
  TATATATTCA AAATCGAATA ATACTCAGTG GTTTAGTTTA CTCAAAATTA AATACCTGAT
  AAGGCTTTCT TTACCTATTG AGGTTTTGCT ATTTCTTTTC ACAAATTTGA GGCTCAGAGA
  CAGATCTTGA TATGGAAATT TAAAAGATCC TTTGATCTAT ATAATGTATT TTAACATTCA
  ATTAGTTTTT GCTTTCTTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8773785	WI_WGS_2_85257621	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6367669					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:84199281 () rs orientation: forward

Symbol	Name	Function Class
Calcrl	calcitonin receptor-like	Intron
Rr560240	regulatory region 560240	1871 bp distal
Rr560241	regulatory region 560241	353 bp proximal