rs6367081 SNP Detail

Summary

• ID
  rs6367081
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:143105456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGTGCAGC ATGGGTCAAG
  TTACTTAGTC TCCTCGACCT TGATTTTCTC TTTTGTAAAA TGGACACGGT GTATCCCTAA
  CCTCATGTGA CTGTTGCGGG GACTCAGTGG GACCTCGGAT GCAGGGCACG ATGCAAGGGG
  TATGCCTCTG AGGTCCATTT TGATTTCAGA TTGAAGACTG TGGAAGATGC CAGGGACCTA
  Y
  AGAGCCTGGC TTTCCTCCCT TTTAACGAAG AATGAGAACC GTCCCTCAGG CAACTCCTGC
  CTGCTTCCCC CTGTCTCCTC TCCCCACTAA TGCCCTTTGA ATTCTATTGA GATCCTTCTC
  CTGAATTCTC TCTGCACCAG TAAAGGAGAG ACAGAGGGCT CGTGCCTCTC CCCAAGTCAG
  ACAGAAGTCC TTATCTAGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	MSM/Ms
ss8773197	WI_WGS_4_141154723	WI	MOUSE	f	SNP		C	T
ss147782210	ENSMUSSNP2622141	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	MSM/Ms
rs6367081					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:143105456 () rs orientation: forward

Symbol	Name	Function Class
Rr604202	regulatory region 604202	468 bp proximal