rs6367080 SNP Detail

Summary

• ID
  rs6367080
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:143105455 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTGTGCAG CATGGGTCAA
  GTTACTTAGT CTCCTCGACC TTGATTTTCT CTTTTGTAAA ATGGACACGG TGTATCCCTA
  ACCTCATGTG ACTGTTGCGG GGACTCAGTG GGACCTCGGA TGCAGGGCAC GATGCAAGGG
  GTATGCCTCT GAGGTCCATT TTGATTTCAG ATTGAAGACT GTGGAAGATG CCAGGGACCT
  R
  CAGAGCCTGG CTTTCCTCCC TTTTAACGAA GAATGAGAAC CGTCCCTCAG GCAACTCCTG
  CCTGCTTCCC CCTGTCTCCT CTCCCCACTA ATGCCCTTTG AATTCTATTG AGATCCTTCT
  CCTGAATTCT CTCTGCACCA GTAAAGGAGA GACAGAGGGC TCGTGCCTCT CCCCAAGTCA
  GACAGAAGTC CTTATCTAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	MSM/Ms
ss8773196	WI_WGS_4_141154722	WI	MOUSE	f	SNP		A	G
ss147782203	ENSMUSSNP5789796	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	MSM/Ms
rs6367080					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:143105455 () rs orientation: forward

Symbol	Name	Function Class
Rr604202	regulatory region 604202	469 bp proximal